Back to pull request #1092

add previously ignored nf-test files. fix gitignore #2809

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Job	Run time
Run pipeline with test data (23.04.0, -profile test,docker --preprocessing_tool fastp --preproces...	6m 10s
Run pipeline with test data (23.04.0, -profile test,docker --preprocessing_tool adapterremoval --...	4m 44s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool bwamem --run_mapdamage_...	17m 50s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool bowtie2 --damagecalcula...	6m 38s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool circularmapper --skip_p...	5m 22s
Run pipeline with test data (23.04.0, -profile test_humanbam,docker --run_mtnucratio --run_contam...	9m 9s
Run pipeline with test data (23.04.0, -profile test_humanbam,docker --run_sexdeterrmine --run_gen...	12m 59s
Run pipeline with test data (23.04.0, -profile test_multiref,docker)	12m 39s
Run pipeline with test data (latest-everything, -profile test,docker --preprocessing_tool fastp -...	6m 39s
Run pipeline with test data (latest-everything, -profile test,docker --preprocessing_tool adapter...	4m 45s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool bwamem --run_...	19m 17s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool bowtie2 --dam...	7m 14s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool circularmappe...	6m 14s
Run pipeline with test data (latest-everything, -profile test_humanbam,docker --run_mtnucratio --...	13m 1s
Run pipeline with test data (latest-everything, -profile test_humanbam,docker --run_sexdeterrmine...	11m 5s
Run pipeline with test data (latest-everything, -profile test_multiref,docker)	13m 12s
	2h 36m 58s