fix preseq lc_extrap call. fixes test_nothing

nf-core · Feb 21, 2025 · 4a94c2f · 4a94c2f
1 parent 3a356b4
commit 4a94c2f
Showing 1 changed file with 1 addition and 4 deletions.
diff --git a/workflows/eager.nf b/workflows/eager.nf
@@ -432,15 +432,12 @@ workflow EAGER {
         ch_multiqc_files = ch_multiqc_files.mix(PRESEQ_CCURVE.out.c_curve.collect { it[1] }.ifEmpty([]))
         ch_versions = ch_versions.mix(PRESEQ_CCURVE.out.versions)
     }
-    else {
-        (!params.mapstats_skip_preseq && params.mapstats_preseq_mode == 'lc_extrap').call {
+    else if (!params.mapstats_skip_preseq && params.mapstats_preseq_mode == 'lc_extrap') {
             PRESEQ_LCEXTRAP(ch_reads_for_deduplication.map { [it[0], it[1]] })
             ch_multiqc_files = ch_multiqc_files.mix(PRESEQ_LCEXTRAP.out.lc_extrap.collect { it[1] }.ifEmpty([]))
             ch_versions = ch_versions.mix(PRESEQ_LCEXTRAP.out.versions)
-        }
     }
 
-
     //
     // MODULE: Bedtools coverage
     //