diff --git a/docs/development/dev_docs.md b/docs/development/dev_docs.md index f8de51e2f..767fb35e6 100644 --- a/docs/development/dev_docs.md +++ b/docs/development/dev_docs.md @@ -33,12 +33,12 @@ To add new input files or options to the reference sheet, you have to complete a 1. Add you new parameter channel to the `if` condition selecting between the direct parameter input or the reference sheet input. 1. below "REFERENCE_INDEXING_MULTI" for reference sheet input - `ch_ = REFERENCE_INDEXING_MULTI.out.` + ` = REFERENCE_INDEXING_MULTI.out.` 2. below "REFERENCE_INDEXING_SINGLE" - `ch_ = REFERENCE_INDEXING_SINGLE.out.` + ` = REFERENCE_INDEXING_SINGLE.out.` 3. Filter out options that have not been provided. - `ch_ = ch_.filter{ it[1] != "" }` + ` = .filter{ it[1] != "" }` 4. Add unzipping of zipped input files with GUNZIP. - 5. Add ch_ to the final emit. - ` = ch_` + 5. Add to the final emit. + ` = ` 6. Call new inputs within the main eager.nf with `REFERENCE_INDEXING.out.`.