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489 Open 1,770 Closed
489 Open 1,770 Closed
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Issues list

Are we adding successful builds to meta.yml? That'd be nice. Then we could just not add to meta.yml on fail but not trigger a CI failure for now.
#8347 opened Apr 22, 2025 by edmundmiller
new module: samclip new module Adding a new module
#8342 opened Apr 21, 2025 by emmcauley
4 tasks done
@emmcauley
new module: purecn/segmentedrun new module Adding a new module
#8331 opened Apr 17, 2025 by lbeltrame
4 tasks done
@lbeltrame
1
new module: rtgtools/bndeval new module Adding a new module
#8324 opened Apr 16, 2025 by kubranarci
3 of 4 tasks
@kubranarci
deprecate custom_getchromsizes bug Something isn't working
#8314 opened Apr 15, 2025 by maxulysse
2 tasks done
wildcard expansion triggering "argument too long" error bug Something isn't working
#8305 opened Apr 15, 2025 by tom-brekke
2 tasks done
1
1
new module: picard/meanqualitybycycle new module Adding a new module
#8288 opened Apr 13, 2025 by mikefeixu
4 tasks done
@mikefeixu
new module: picard/collectalignmentsummarymetrics new module Adding a new module
#8285 opened Apr 13, 2025 by mikefeixu
4 tasks done
@mikefeixu
new module: purecn/presegmented new module Adding a new module
#8270 opened Apr 11, 2025 by lbeltrame
4 tasks done
@lbeltrame
Remove custom docker.runOptions from nextflow.configs living in tests folders bug Something isn't working
#8252 opened Apr 9, 2025 by famosab
[FEATURE] update cellranger modules containers to v9 update module
#8244 opened Apr 8, 2025 by fmalmeida
@fmalmeida
2
[BATCH] Module updates that do not require pipeline updates
#8239 opened Apr 8, 2025 by famosab
[BATCH] Module updates requiring pipeline updates
#8238 opened Apr 8, 2025 by famosab
[FEATURE] nf-test assertions - use md5 sums for readLines nf-test
#8236 opened Apr 8, 2025 by famosab
46 tasks
new module: picard/genotypeconcordance new module Adding a new module
#8225 opened Apr 7, 2025 by kjellinjonas
3 of 4 tasks
@kjellinjonas
new module: pbtk/bam2fasta new module Adding a new module
#8222 opened Apr 7, 2025 by Shubhamverma-bioinfo
4 tasks done
@Shubhamverma-bioinfo
new module: Yleaf new module Adding a new module
#8211 opened Apr 4, 2025 by trianglegrrl
3 of 4 tasks
1
@trianglegrrl
Update biocontainers/ont-modkit Docker tag to v0.4.1
#8197 opened Apr 2, 2025 by jkh00
[FEATURE] Use nft-vcf in the freebayes tests
#8195 opened Apr 2, 2025 by maxulysse
new module: varify new module Adding a new module
#8169 opened Mar 31, 2025 by Lupphes
3 of 4 tasks
new module: fastplong new module Adding a new module
#8168 opened Mar 31, 2025 by Lupphes
4 tasks done
@Lupphes
1
new module: pyclonevi new module Adding a new module
#8165 opened Mar 31, 2025 by giorgiagandolfi
4 tasks done
@giorgiagandolfi
GFASTATS fails when genome size positional argument is given bug Something isn't working
#8164 opened Mar 31, 2025 by mahesh-panchal
2 tasks done
MLST Unit Tests Fail bug Something isn't working
#8152 opened Mar 27, 2025 by acvander
2 tasks done
new module: ARACNe3 new module Adding a new module
#8142 opened Mar 26, 2025 by stikos
4 tasks done
1
@stikos
ProTip! Updated in the last three days: updated:>2025-04-20.