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Update multiqc implementation#479

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Joon-Klaps wants to merge 17 commits intodevnf-core/viralrecon:devfrom

patch-multiqc-implnf-core/viralrecon:patch-multiqc-implCopy head branch name to clipboard

Commits

Commits on Mar 24, 2025

• nanpore workflow & multiqc patch

  Joon-Klaps

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  13c144d

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• Merge branch 'dev' into patch-multiqc-impl

  Joon-Klaps

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  3c8198b

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• update illumina

  Joon-Klaps

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  fb05d81

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• fix prettier

  Joon-Klaps

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  990d416

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• undefined variables & get languange server working

  Joon-Klaps

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  93f6638

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• language server nanopore

  Joon-Klaps

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  b939797

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• bcftools.out fix

  Joon-Klaps

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  9c3fced

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• fix closure mixing

  Joon-Klaps

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  1d0f04f

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• fixing custom removal of files mqc

  Joon-Klaps

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  0d19f9e

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• closure issue mqc

  Joon-Klaps

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  722bf31

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• add config channels in workflow scope

  Joon-Klaps

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  f0f6fa1

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Commits on Mar 25, 2025

• move multiqc to viralrecon main

  Joon-Klaps

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  d170975

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• undo nanopore config change

  Joon-Klaps

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  d2c5e5e

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• reinclude the if statements for including workflows

  Joon-Klaps

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  15072f2

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Commits on Mar 26, 2025

• consistent naming with previous variables & remove unused modules

  Joon-Klaps

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  8de2f22

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• update changelog

  Joon-Klaps

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  7bc7cca

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• patch config names for mqc and remove pathfilters

  Joon-Klaps

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  0e70c74

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