0.16.1

Release Notes

Bug-fix release in 0.16.x series.

This PR improves BIDS Derivatives compliance, fixes an issue with reading datasets with subjects of the form sub-sXYZ, and improves compatibility with more recent matplotlib.

CHANGES

• FIX: Participant labels starting with [sub] cannot be used (#890)
• FIX: Change deprecated normed to density in parameters to hist() (#888)
• ENH: Write derivatives metadata (#885)
• ENH: Add --pdb option to make debugging easier (#884)

0.16.0

Release Notes

New feature release in 0.16.x series.

This version removes the FSL dependency from the fMRI workflow.

CHANGES

• FIX: Skip version cache on read-only filesystems (#862)
• FIX: Honor $OMP_NUM_THREADS environment variable (#848)
• RF: Simplify comprehensions, using easy-to-read var names (#875)
• RF: Free the fMRI workflow from FSL (#842)
• CI: Fix up Circle builds (#876)
• CI: Update machine images on Circle (#874)

0.15.2

Release Notes

A bugfix release containing mostly maintenance actions and documentation improvements. This version drops Python 3.5. The core of MRIQC has adopted the config-module pattern from fMRIPrep.

With thanks to A. Erramuzpe, @justbennet, U. Tooley, and A. Huffman for contributions.

CHANGES

• RF: Adopt config module pattern from fMRIPrep (#837)
• MAINT: Clear the clutter of warnings (#838)
• MAINT: Drop Python 3.5, simplify linting (#833)
• MAINT: Update to latest Ubuntu Xenial tag (#814)
• MAINT: Centralize all requirements and versions on setup.cfg (#819)
• MAINT: Use recent Python image to build packages in CircleCI (#808)
• DOC: Improve AQI (and other IQMs) and boxplot whiskers descriptions (#816)
• DOC: Refactor how documentation is built on CircleCI (#818)
• DOC: Corrected a couple of typos in --help text (#809)

0.15.2rc1

fix(circleCI): split deploy build into Docker and Pypi #801

0.15.1

Release Notes

A maintenance patch release updating PyBIDS.

CHANGES

• FIX: FileNotFoundError when MELODIC (--ica) does not converge (#800) @oesteban
• MAINT: Migrate MRIQC to a setup.cfg style of installation (#799) @oesteban
• MAINT: Use PyBIDS 0.9.2+ via niworkflows PR (#796) @effigies

0.15.0.post1

Forcing a push to Zenodo.

0.15.0

Release Notes

A long overdue update, pinning updated versions of
TemplateFlow <https://doi.org/10.5281/zenodo.2583289>__ and
Niworkflows <https://github.com/poldracklab/niworkflows>__.
With thanks to @garciadias for contributions.

CHANGES

• ENH: Revision of QI2 (#606) @oesteban
• FIX: Set matplotlib backend early (#759) @oesteban
• FIX: Niworkflows pin <0.5 (#766) @oesteban
• DOC: Update BIDS validation link. (#764) @garciadias
• DOC: Add data sharing agreement (#765) @oesteban
• FIX: Catch uncaught exception in WebAPI upload. (#774) @rwblair
• FIX/DOC: Append new line after dashes in mriqc_run help text (#777) @rwblair
• ENH: Use TemplateFlow and niworkflows-0.8.x (#782) @oesteban
• FIX: Correctly set WebAPI rating endpoint in BOLD reports. (#785) @oesteban
• FIX: Correctly process values of rating widget (#787) @oesteban

0.14.2

Release Notes

Hotfix release

CHANGES

• [FIX] Preempt pandas resolving Path objects (#746) @oesteban
• [FIX] Codacy issues (#745) @oesteban

0.14.1

Release Notes

A hotfix release, since the outputs of multi-session datasets were not correctly structured. Includes a new toggle button to close off and bring back on the rating widget.

CHANGES

• [FIX] Calculate relative path with sessions (#742) @oesteban
• [ENH] Add a toggle button to rating widget (#743) @oesteban

0.14.0

Release Notes

A new release with a totally new rating widget. Now, it uploads the ratings to the Web API and also allows to download a JSON file with the manual rating to be stored in disk.

CHANGES

• [ENH] New feedback widget (#740) @oesteban