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@ocbe-uio

Oslo Centre for Biostatistics and Epidemiology

This is where we host some of the scientific software we produce at OCBE, a joint center between the University of Oslo and the Oslo University Hospital.

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  1. BayesMallows BayesMallows Public

    R-package for Bayesian preference learning with the Mallows rank model.

    R 21 11

  2. teaching_mf9130e teaching_mf9130e Public

    Course material for MF9130E

    R 16 10

  3. DIscBIO DIscBIO Public

    A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics

    Jupyter Notebook 12 5

  4. survomics survomics Public

    Tutorial on survival modeling with omics data

    TeX 11 1

  5. rBAPS rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    R 10 4

  6. trajpy trajpy Public

    Trajpy - empowering feature engineering for trajectory analysis across domains.

    Python 7 2

Repositories

Showing 10 of 56 repositories
  • kids-chd Public

    Congenital Heart Disease among Children

    ocbe-uio/kids-chd’s past year of commit activity
    R 0 GPL-3.0 0 6 0 Updated Feb 26, 2025
  • rangejoin Public

    Divides a dataset into control and treatment groups and matches

    ocbe-uio/rangejoin’s past year of commit activity
    R 0 GPL-3.0 0 3 0 Updated Feb 25, 2025
  • public-slides Public

    A repository for slides presented to the public or publicly-available slides

    ocbe-uio/public-slides’s past year of commit activity
    HTML 1 CC-BY-SA-4.0 0 0 0 Updated Feb 25, 2025
  • BayesMallows Public

    R-package for Bayesian preference learning with the Mallows rank model.

    ocbe-uio/BayesMallows’s past year of commit activity
    R 21 GPL-3.0 11 6 0 Updated Feb 11, 2025
  • norkost_doc Public

    Documentation for Norkost x SPADE

    ocbe-uio/norkost_doc’s past year of commit activity
    R 0 MIT 0 0 0 Updated Feb 10, 2025
  • noreden_doc Public

    Documentation for NorEden project

    ocbe-uio/noreden_doc’s past year of commit activity
    R 0 0 2 1 Updated Jan 27, 2025
  • pCRscore Public

    Python package to calculate pCR scores

    ocbe-uio/pCRscore’s past year of commit activity
    Python 0 GPL-3.0 0 4 0 Updated Jan 19, 2025
  • rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    ocbe-uio/rBAPS’s past year of commit activity
    R 10 GPL-3.0 4 8 (2 issues need help) 0 Updated Jan 15, 2025
  • MADMMplasso Public

    Multi variate multi response 'ADMM' with interaction effects

    ocbe-uio/MADMMplasso’s past year of commit activity
    R 1 GPL-3.0 0 2 0 Updated Jan 9, 2025
  • course_med3007 Public

    Course website for MED3007: Statistical Principles in Genomics

    ocbe-uio/course_med3007’s past year of commit activity
    R 1 MIT 0 0 0 Updated Dec 20, 2024
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