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@oicr-gsi

Genome Sequence Informatics

Repositories for OICR's Genome Sequence Informatics team

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  1. shesmu shesmu Public

    Decision-driven action launching system

    Java 8 4

  2. djerba djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    Python 9 5

  3. vidarr vidarr Public

    Analysis provenance tracking server

    Java 1 1

  4. data_release data_release Public

    Scripts for releasing data generated at OICR to stakeholders

    Python

Repositories

Showing 10 of 237 repositories
  • djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    oicr-gsi/djerba’s past year of commit activity
    Python 9 GPL-3.0 5 5 5 Updated Feb 21, 2025
  • dimsum Public

    QC Tracking dashboard

    oicr-gsi/dimsum’s past year of commit activity
    Java 1 GPL-3.0 0 0 1 Updated Feb 21, 2025
  • somnus Public

    Service inhibitor service

    oicr-gsi/somnus’s past year of commit activity
    Java 0 0 0 1 Updated Feb 20, 2025
  • vidarr-tools Public

    The home of Python tools for use with Víðarr

    oicr-gsi/vidarr-tools’s past year of commit activity
    WDL 0 1 0 0 Updated Feb 20, 2025
  • mrdetect Public

    workflow to detect Minimal Residual disease with MRDetect

    oicr-gsi/mrdetect’s past year of commit activity
    WDL 0 0 1 0 Updated Feb 19, 2025
  • provenanceReporter Public
    oicr-gsi/provenanceReporter’s past year of commit activity
    Python 0 0 1 0 Updated Feb 19, 2025
  • nabu Public

    QC tracking for files via a web service

    oicr-gsi/nabu’s past year of commit activity
    JavaScript 0 MIT 0 2 1 Updated Feb 18, 2025
  • bwaMeth Public

    Workflow to run bwa-meth, the fast aligner for EM-seq/BS-Seq reads.

    oicr-gsi/bwaMeth’s past year of commit activity
    WDL 0 0 0 1 Updated Feb 15, 2025
  • shesmu Public

    Decision-driven action launching system

    oicr-gsi/shesmu’s past year of commit activity
    Java 8 MIT 4 0 3 Updated Feb 14, 2025
  • vardict Public
    oicr-gsi/vardict’s past year of commit activity
    0 0 0 1 Updated Feb 14, 2025
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