diff --git a/analysis/hrg1.do b/analysis/hrg1.do index 407bfbb..74514f6 100644 --- a/analysis/hrg1.do +++ b/analysis/hrg1.do @@ -114,9 +114,8 @@ global hrg "aa22 aa23 aa24 aa25 aa26 aa28 aa29 aa30 aa31 aa32 aa33 aa35 aa43 aa5 foreach hrg of global hrg { file write tablecontent ("`hrg'") bysort ckd_group: egen total_`hrg'_admissions = total(`hrg'_admissions) -drop `hrg'_admissions forvalues i=1/5 { -qui safecount if ckd_group==`i' & `hrg'_count==1 +qui safecount if ckd_group==`i' & `hrg'_admissions!=0 local `hrg'_count_`i' = round(r(N),5) qui su total_`hrg'_admissions if ckd_group==`i' local `hrg'_admissions_`i' = r(mean) @@ -127,8 +126,8 @@ else { file write tablecontent _tab ("REDACTED") _tab ("REDACTED") } } +drop `hrg'_admissions drop total_`hrg'_admissions -drop `hrg'_count file write tablecontent _n } diff --git a/analysis/variables_hrg1.py b/analysis/variables_hrg1.py index fae702f..a69c574 100644 --- a/analysis/variables_hrg1.py +++ b/analysis/variables_hrg1.py @@ -6,13 +6,6 @@ def generate_variables_hrg1(index_date_variable): variables_hrg1 = dict( - AA22_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA22_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA22, returning="number_of_matches_in_period", @@ -23,13 +16,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA23_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA23_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA23, returning="number_of_matches_in_period", @@ -40,13 +26,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA24_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA24_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA24, returning="number_of_matches_in_period", @@ -57,13 +36,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA25_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA25_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA25, returning="number_of_matches_in_period", @@ -74,13 +46,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA26_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA26_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA26, returning="number_of_matches_in_period", @@ -91,13 +56,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA28_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA28_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA28, returning="number_of_matches_in_period", @@ -108,13 +66,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA29_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA29_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA29, returning="number_of_matches_in_period", @@ -125,13 +76,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA30_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA30_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA30, returning="number_of_matches_in_period", @@ -142,13 +86,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA31_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA31_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA31, returning="number_of_matches_in_period", @@ -159,13 +96,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA35_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA35_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA35, returning="number_of_matches_in_period", @@ -176,13 +106,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA43_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_AA43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA43_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_AA43, returning="number_of_matches_in_period", @@ -193,13 +116,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ24_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_BZ24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ24_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_BZ24, returning="number_of_matches_in_period", @@ -210,13 +126,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CB01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_CB01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CB01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_CB01, returning="number_of_matches_in_period", @@ -227,13 +136,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CB02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_CB02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CB02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_CB02, returning="number_of_matches_in_period", @@ -244,13 +146,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DX21_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DX21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DX21_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DX21, returning="number_of_matches_in_period", @@ -261,13 +156,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ09, returning="number_of_matches_in_period", @@ -278,13 +166,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ10_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ10_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ10, returning="number_of_matches_in_period", @@ -295,13 +176,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ11_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ11_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ11, returning="number_of_matches_in_period", @@ -312,13 +186,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ12, returning="number_of_matches_in_period", @@ -329,13 +196,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ13_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ13_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ13, returning="number_of_matches_in_period", @@ -346,13 +206,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ14_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ14_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ14, returning="number_of_matches_in_period", @@ -363,13 +216,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ15_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ15_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ15, returning="number_of_matches_in_period", @@ -380,13 +226,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ16_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ16_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ16, returning="number_of_matches_in_period", @@ -397,13 +236,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ17_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ17_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ17, returning="number_of_matches_in_period", @@ -414,13 +246,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ18_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ18_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ18, returning="number_of_matches_in_period", @@ -431,13 +256,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ19_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ19_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ19, returning="number_of_matches_in_period", @@ -448,13 +266,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ20_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ20_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ20, returning="number_of_matches_in_period", @@ -465,13 +276,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ22_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ22_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ22, returning="number_of_matches_in_period", @@ -482,13 +286,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ23_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ23_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ23, returning="number_of_matches_in_period", @@ -499,13 +296,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ24_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ24_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ24, returning="number_of_matches_in_period", @@ -516,13 +306,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ25_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ25_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ25, returning="number_of_matches_in_period", @@ -533,13 +316,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ26_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ26_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ26, returning="number_of_matches_in_period", @@ -550,13 +326,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ27_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ27_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ27, returning="number_of_matches_in_period", @@ -567,13 +336,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ28_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ28_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ28, returning="number_of_matches_in_period", @@ -584,13 +346,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ29_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ29_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ29, returning="number_of_matches_in_period", @@ -601,13 +356,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ51_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ51_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ51, returning="number_of_matches_in_period", @@ -618,13 +366,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ65_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_DZ65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ65_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_DZ65, returning="number_of_matches_in_period", @@ -635,13 +376,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB02, returning="number_of_matches_in_period", @@ -652,13 +386,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB03, returning="number_of_matches_in_period", @@ -669,13 +396,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB04, returning="number_of_matches_in_period", @@ -686,13 +406,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB05, returning="number_of_matches_in_period", @@ -703,13 +416,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB06, returning="number_of_matches_in_period", @@ -720,13 +426,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB07, returning="number_of_matches_in_period", @@ -737,13 +436,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB08, returning="number_of_matches_in_period", @@ -754,13 +446,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB09, returning="number_of_matches_in_period", @@ -771,13 +456,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB10_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB10_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB10, returning="number_of_matches_in_period", @@ -788,13 +466,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB12, returning="number_of_matches_in_period", @@ -805,13 +476,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB13_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB13_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB13, returning="number_of_matches_in_period", @@ -822,13 +486,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB14_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB14_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB14, returning="number_of_matches_in_period", @@ -839,13 +496,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EB15_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_EB15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EB15_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_EB15, returning="number_of_matches_in_period", @@ -856,13 +506,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA32, returning="number_of_matches_in_period", @@ -873,13 +516,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA33, returning="number_of_matches_in_period", @@ -890,13 +526,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA50, returning="number_of_matches_in_period", @@ -907,13 +536,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA51, returning="number_of_matches_in_period", @@ -924,13 +546,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA52, returning="number_of_matches_in_period", @@ -941,13 +556,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA53, returning="number_of_matches_in_period", @@ -958,13 +566,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA54, returning="number_of_matches_in_period", @@ -975,13 +576,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA55, returning="number_of_matches_in_period", @@ -992,13 +586,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA57_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA57_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA57, returning="number_of_matches_in_period", @@ -1009,13 +596,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA60, returning="number_of_matches_in_period", @@ -1026,13 +606,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA61_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA61, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA61_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA61, returning="number_of_matches_in_period", @@ -1043,13 +616,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA71, returning="number_of_matches_in_period", @@ -1060,13 +626,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA81_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA81, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA81_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA81, returning="number_of_matches_in_period", @@ -1077,13 +636,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AA83_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AA83, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AA83_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AA83, returning="number_of_matches_in_period", @@ -1094,13 +646,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB11, returning="number_of_matches_in_period", @@ -1111,13 +656,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB15, returning="number_of_matches_in_period", @@ -1128,13 +666,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB16, returning="number_of_matches_in_period", @@ -1145,13 +676,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB18, returning="number_of_matches_in_period", @@ -1162,13 +686,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB20, returning="number_of_matches_in_period", @@ -1179,13 +696,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB21, returning="number_of_matches_in_period", @@ -1196,13 +706,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB22, returning="number_of_matches_in_period", @@ -1213,13 +716,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB23, returning="number_of_matches_in_period", @@ -1230,13 +726,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB24, returning="number_of_matches_in_period", @@ -1247,13 +736,6 @@ def generate_variables_hrg1(index_date_variable): } ), - AB26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_AB26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - AB26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_AB26, returning="number_of_matches_in_period", @@ -1264,13 +746,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ31, returning="number_of_matches_in_period", @@ -1281,13 +756,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ32, returning="number_of_matches_in_period", @@ -1298,13 +766,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ33, returning="number_of_matches_in_period", @@ -1315,13 +776,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ41, returning="number_of_matches_in_period", @@ -1332,13 +786,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ42, returning="number_of_matches_in_period", @@ -1349,13 +796,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ44, returning="number_of_matches_in_period", @@ -1366,13 +806,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ45, returning="number_of_matches_in_period", @@ -1383,13 +816,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ46_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ46, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ46_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ46, returning="number_of_matches_in_period", @@ -1400,13 +826,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ51, returning="number_of_matches_in_period", @@ -1417,13 +836,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ53, returning="number_of_matches_in_period", @@ -1434,13 +846,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ54, returning="number_of_matches_in_period", @@ -1451,13 +856,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ56, returning="number_of_matches_in_period", @@ -1468,13 +866,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ57_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ57_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ57, returning="number_of_matches_in_period", @@ -1485,13 +876,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ60, returning="number_of_matches_in_period", @@ -1502,13 +886,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ61_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ61, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ61_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ61, returning="number_of_matches_in_period", @@ -1519,13 +896,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ62_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ62, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ62_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ62, returning="number_of_matches_in_period", @@ -1536,13 +906,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ63, returning="number_of_matches_in_period", @@ -1553,13 +916,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ64_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ64, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ64_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ64, returning="number_of_matches_in_period", @@ -1570,13 +926,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ65_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ65_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ65, returning="number_of_matches_in_period", @@ -1587,13 +936,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ72_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ72, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ72_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ72, returning="number_of_matches_in_period", @@ -1604,13 +946,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ73_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ73, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ73_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ73, returning="number_of_matches_in_period", @@ -1621,13 +956,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ74_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ74, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ74_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ74, returning="number_of_matches_in_period", @@ -1638,13 +966,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ80_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ80, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ80_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ80, returning="number_of_matches_in_period", @@ -1655,13 +976,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ81_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ81, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ81_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ81, returning="number_of_matches_in_period", @@ -1672,13 +986,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ83_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ83, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ83_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ83, returning="number_of_matches_in_period", @@ -1689,13 +996,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ84_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ84, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ84_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ84, returning="number_of_matches_in_period", @@ -1706,13 +1006,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ86_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ86, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ86_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ86, returning="number_of_matches_in_period", @@ -1723,13 +1016,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ87_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ87, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ87_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ87, returning="number_of_matches_in_period", @@ -1740,13 +1026,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ88_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ88, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ88_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ88, returning="number_of_matches_in_period", @@ -1757,13 +1036,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ89_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ89, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ89_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ89, returning="number_of_matches_in_period", @@ -1774,13 +1046,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ91_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ91, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ91_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ91, returning="number_of_matches_in_period", @@ -1791,13 +1056,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ92_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ92, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ92_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ92, returning="number_of_matches_in_period", @@ -1808,13 +1066,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ93_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ93, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ93_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ93, returning="number_of_matches_in_period", @@ -1825,13 +1076,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ94_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ94, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ94_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ94, returning="number_of_matches_in_period", @@ -1842,13 +1086,6 @@ def generate_variables_hrg1(index_date_variable): } ), - BZ95_count=patients.admitted_to_hospital( - with_these_procedures=hrg_BZ95, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - BZ95_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_BZ95, returning="number_of_matches_in_period", @@ -1859,13 +1096,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA01, returning="number_of_matches_in_period", @@ -1876,13 +1106,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA02, returning="number_of_matches_in_period", @@ -1893,13 +1116,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA03, returning="number_of_matches_in_period", @@ -1910,13 +1126,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA04, returning="number_of_matches_in_period", @@ -1927,13 +1136,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA05, returning="number_of_matches_in_period", @@ -1944,13 +1146,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA10, returning="number_of_matches_in_period", @@ -1961,13 +1156,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA11, returning="number_of_matches_in_period", @@ -1978,13 +1166,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA12, returning="number_of_matches_in_period", @@ -1995,13 +1176,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA13, returning="number_of_matches_in_period", @@ -2012,13 +1186,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA14, returning="number_of_matches_in_period", @@ -2029,13 +1196,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA15, returning="number_of_matches_in_period", @@ -2046,13 +1206,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA16, returning="number_of_matches_in_period", @@ -2063,13 +1216,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA20, returning="number_of_matches_in_period", @@ -2080,13 +1226,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA21, returning="number_of_matches_in_period", @@ -2097,13 +1236,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA22, returning="number_of_matches_in_period", @@ -2114,13 +1246,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA23, returning="number_of_matches_in_period", @@ -2131,13 +1256,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA24, returning="number_of_matches_in_period", @@ -2148,13 +1266,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA25, returning="number_of_matches_in_period", @@ -2165,13 +1276,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA26, returning="number_of_matches_in_period", @@ -2182,13 +1286,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA27_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA27_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA27, returning="number_of_matches_in_period", @@ -2199,13 +1296,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA28_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA28_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA28, returning="number_of_matches_in_period", @@ -2216,13 +1306,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA29_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA29_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA29, returning="number_of_matches_in_period", @@ -2233,13 +1316,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA30, returning="number_of_matches_in_period", @@ -2250,13 +1326,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA31, returning="number_of_matches_in_period", @@ -2267,13 +1336,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA32, returning="number_of_matches_in_period", @@ -2284,13 +1346,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA33, returning="number_of_matches_in_period", @@ -2301,13 +1356,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA34, returning="number_of_matches_in_period", @@ -2318,13 +1366,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA35_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA35_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA35, returning="number_of_matches_in_period", @@ -2335,13 +1376,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA36, returning="number_of_matches_in_period", @@ -2352,13 +1386,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA37_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA37, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA37_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA37, returning="number_of_matches_in_period", @@ -2369,13 +1396,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA38_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA38_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA38, returning="number_of_matches_in_period", @@ -2386,13 +1406,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA39_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA39, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA39_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA39, returning="number_of_matches_in_period", @@ -2403,13 +1416,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA40, returning="number_of_matches_in_period", @@ -2420,13 +1426,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA42, returning="number_of_matches_in_period", @@ -2437,13 +1436,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA43, returning="number_of_matches_in_period", @@ -2454,13 +1446,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA50, returning="number_of_matches_in_period", @@ -2471,13 +1456,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA51, returning="number_of_matches_in_period", @@ -2488,13 +1466,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA52, returning="number_of_matches_in_period", @@ -2505,13 +1476,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA53, returning="number_of_matches_in_period", @@ -2522,13 +1486,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA54, returning="number_of_matches_in_period", @@ -2539,13 +1496,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA55, returning="number_of_matches_in_period", @@ -2556,13 +1506,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA60, returning="number_of_matches_in_period", @@ -2573,13 +1516,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA62_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA62, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA62_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA62, returning="number_of_matches_in_period", @@ -2590,13 +1526,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA63, returning="number_of_matches_in_period", @@ -2607,13 +1536,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA64_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA64, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA64_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA64, returning="number_of_matches_in_period", @@ -2624,13 +1546,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA65_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA65_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA65, returning="number_of_matches_in_period", @@ -2641,13 +1556,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA66_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA66, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA66_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA66, returning="number_of_matches_in_period", @@ -2658,13 +1566,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA67_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA67, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA67_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA67, returning="number_of_matches_in_period", @@ -2675,13 +1576,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA68_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA68, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA68_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA68, returning="number_of_matches_in_period", @@ -2692,13 +1586,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA69_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA69, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA69_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA69, returning="number_of_matches_in_period", @@ -2709,13 +1596,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA70_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA70, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA70_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA70, returning="number_of_matches_in_period", @@ -2726,13 +1606,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA71, returning="number_of_matches_in_period", @@ -2743,13 +1616,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA80_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA80, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA80_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA80, returning="number_of_matches_in_period", @@ -2760,13 +1626,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA81_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA81, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA81_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA81, returning="number_of_matches_in_period", @@ -2777,13 +1636,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA82_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA82, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA82_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA82, returning="number_of_matches_in_period", @@ -2794,13 +1646,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA83_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA83, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA83_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA83, returning="number_of_matches_in_period", @@ -2811,13 +1656,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA84_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA84, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA84_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA84, returning="number_of_matches_in_period", @@ -2828,13 +1666,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA85_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA85, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA85_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA85, returning="number_of_matches_in_period", @@ -2845,13 +1676,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA86_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA86, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA86_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA86, returning="number_of_matches_in_period", @@ -2862,13 +1686,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA91_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA91, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA91_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA91, returning="number_of_matches_in_period", @@ -2879,13 +1696,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA92_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA92, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA92_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA92, returning="number_of_matches_in_period", @@ -2896,13 +1706,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA93_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA93, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA93_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA93, returning="number_of_matches_in_period", @@ -2913,13 +1716,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA94_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA94, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA94_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA94, returning="number_of_matches_in_period", @@ -2930,13 +1726,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA95_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA95, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA95_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA95, returning="number_of_matches_in_period", @@ -2947,13 +1736,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA96_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA96, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA96_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA96, returning="number_of_matches_in_period", @@ -2964,13 +1746,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA97_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA97, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA97_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA97, returning="number_of_matches_in_period", @@ -2981,13 +1756,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CA98_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CA98, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CA98_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CA98, returning="number_of_matches_in_period", @@ -2998,13 +1766,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD01, returning="number_of_matches_in_period", @@ -3015,13 +1776,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD02, returning="number_of_matches_in_period", @@ -3032,13 +1786,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD03, returning="number_of_matches_in_period", @@ -3049,13 +1796,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD04, returning="number_of_matches_in_period", @@ -3066,13 +1806,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD05, returning="number_of_matches_in_period", @@ -3083,13 +1816,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD06, returning="number_of_matches_in_period", @@ -3100,13 +1826,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD07, returning="number_of_matches_in_period", @@ -3117,13 +1836,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD08, returning="number_of_matches_in_period", @@ -3134,13 +1846,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD09, returning="number_of_matches_in_period", @@ -3151,13 +1856,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD10, returning="number_of_matches_in_period", @@ -3168,13 +1866,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD11, returning="number_of_matches_in_period", @@ -3185,13 +1876,6 @@ def generate_variables_hrg1(index_date_variable): } ), - CD12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_CD12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - CD12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_CD12, returning="number_of_matches_in_period", @@ -3202,13 +1886,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ01, returning="number_of_matches_in_period", @@ -3219,13 +1896,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ02, returning="number_of_matches_in_period", @@ -3236,13 +1906,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ30, returning="number_of_matches_in_period", @@ -3253,13 +1916,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ31, returning="number_of_matches_in_period", @@ -3270,13 +1926,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ32, returning="number_of_matches_in_period", @@ -3287,13 +1936,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ33, returning="number_of_matches_in_period", @@ -3304,13 +1946,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ36, returning="number_of_matches_in_period", @@ -3321,13 +1956,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ37_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ37, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ37_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ37, returning="number_of_matches_in_period", @@ -3338,13 +1966,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ38_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ38_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ38, returning="number_of_matches_in_period", @@ -3355,13 +1976,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ42, returning="number_of_matches_in_period", @@ -3372,13 +1986,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ45, returning="number_of_matches_in_period", @@ -3389,13 +1996,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ46_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ46, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ46_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ46, returning="number_of_matches_in_period", @@ -3406,13 +2006,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ49_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ49, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ49_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ49, returning="number_of_matches_in_period", @@ -3423,13 +2016,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ50, returning="number_of_matches_in_period", @@ -3440,13 +2026,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ55, returning="number_of_matches_in_period", @@ -3457,13 +2036,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ56, returning="number_of_matches_in_period", @@ -3474,13 +2046,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ57_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ57_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ57, returning="number_of_matches_in_period", @@ -3491,13 +2056,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ58_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ58, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ58_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ58, returning="number_of_matches_in_period", @@ -3508,13 +2066,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ59_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ59, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ59_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ59, returning="number_of_matches_in_period", @@ -3525,13 +2076,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ60, returning="number_of_matches_in_period", @@ -3542,13 +2086,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ63, returning="number_of_matches_in_period", @@ -3559,13 +2096,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ64_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ64, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ64_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ64, returning="number_of_matches_in_period", @@ -3576,13 +2106,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ67_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ67, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ67_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ67, returning="number_of_matches_in_period", @@ -3593,13 +2116,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ68_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ68, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ68_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ68, returning="number_of_matches_in_period", @@ -3610,13 +2126,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ69_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ69, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ69_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ69, returning="number_of_matches_in_period", @@ -3627,13 +2136,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ70_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ70, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ70_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ70, returning="number_of_matches_in_period", @@ -3644,13 +2146,6 @@ def generate_variables_hrg1(index_date_variable): } ), - DZ71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_DZ71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - DZ71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_DZ71, returning="number_of_matches_in_period", @@ -3661,13 +2156,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EC11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EC11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EC11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EC11, returning="number_of_matches_in_period", @@ -3678,13 +2166,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EC12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EC12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EC12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EC12, returning="number_of_matches_in_period", @@ -3695,13 +2176,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EC13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EC13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EC13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EC13, returning="number_of_matches_in_period", @@ -3712,13 +2186,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EC14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EC14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EC14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EC14, returning="number_of_matches_in_period", @@ -3729,13 +2196,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EC15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EC15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EC15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EC15, returning="number_of_matches_in_period", @@ -3746,13 +2206,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EC21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EC21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EC21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EC21, returning="number_of_matches_in_period", @@ -3763,13 +2216,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED01, returning="number_of_matches_in_period", @@ -3780,13 +2226,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED05, returning="number_of_matches_in_period", @@ -3797,13 +2236,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED08, returning="number_of_matches_in_period", @@ -3814,13 +2246,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED09, returning="number_of_matches_in_period", @@ -3831,13 +2256,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED11, returning="number_of_matches_in_period", @@ -3848,13 +2266,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED12, returning="number_of_matches_in_period", @@ -3865,13 +2276,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED13, returning="number_of_matches_in_period", @@ -3882,13 +2286,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED14, returning="number_of_matches_in_period", @@ -3899,13 +2296,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED15, returning="number_of_matches_in_period", @@ -3916,13 +2306,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED18, returning="number_of_matches_in_period", @@ -3933,13 +2316,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED24, returning="number_of_matches_in_period", @@ -3950,13 +2326,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED25, returning="number_of_matches_in_period", @@ -3967,13 +2336,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED26, returning="number_of_matches_in_period", @@ -3984,13 +2346,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED27_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED27_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED27, returning="number_of_matches_in_period", @@ -4001,13 +2356,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED28_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED28_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED28, returning="number_of_matches_in_period", @@ -4018,13 +2366,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED30, returning="number_of_matches_in_period", @@ -4035,13 +2376,6 @@ def generate_variables_hrg1(index_date_variable): } ), - ED31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_ED31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - ED31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_ED31, returning="number_of_matches_in_period", @@ -4052,13 +2386,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY01, returning="number_of_matches_in_period", @@ -4069,13 +2396,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY02, returning="number_of_matches_in_period", @@ -4086,13 +2406,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY04, returning="number_of_matches_in_period", @@ -4103,13 +2416,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY06, returning="number_of_matches_in_period", @@ -4120,13 +2426,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY08, returning="number_of_matches_in_period", @@ -4137,13 +2436,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY11, returning="number_of_matches_in_period", @@ -4154,13 +2446,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY12, returning="number_of_matches_in_period", @@ -4171,13 +2456,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY13, returning="number_of_matches_in_period", @@ -4188,13 +2466,6 @@ def generate_variables_hrg1(index_date_variable): } ), - EY17_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY17_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY17, returning="number_of_matches_in_period", diff --git a/analysis/variables_hrg2.py b/analysis/variables_hrg2.py index 81e24ac..17c224d 100644 --- a/analysis/variables_hrg2.py +++ b/analysis/variables_hrg2.py @@ -6,13 +6,6 @@ def generate_variables_hrg2(index_date_variable): variables_hrg2 = dict( - FD01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD01, returning="number_of_matches_in_period", @@ -23,13 +16,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FD02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD02, returning="number_of_matches_in_period", @@ -40,13 +26,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FD03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD03, returning="number_of_matches_in_period", @@ -57,13 +36,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FD04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD04, returning="number_of_matches_in_period", @@ -74,13 +46,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FD05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD05, returning="number_of_matches_in_period", @@ -91,13 +56,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FD10_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD10_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD10, returning="number_of_matches_in_period", @@ -108,13 +66,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FD11_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_FD11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FD11_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_FD11, returning="number_of_matches_in_period", @@ -125,13 +76,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GC01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_GC01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GC01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_GC01, returning="number_of_matches_in_period", @@ -142,13 +86,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GC12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_GC12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GC12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_GC12, returning="number_of_matches_in_period", @@ -159,13 +96,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GC17_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_GC17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GC17_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_GC17, returning="number_of_matches_in_period", @@ -176,13 +106,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GC18_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_GC18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GC18_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_GC18, returning="number_of_matches_in_period", @@ -193,13 +116,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC20_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC20_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC20, returning="number_of_matches_in_period", @@ -210,13 +126,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC21_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC21_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC21, returning="number_of_matches_in_period", @@ -227,13 +136,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC26_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC26_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC26, returning="number_of_matches_in_period", @@ -244,13 +146,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC27_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC27_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC27, returning="number_of_matches_in_period", @@ -261,13 +156,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC28_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC28_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC28, returning="number_of_matches_in_period", @@ -278,13 +166,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC29_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC29_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC29, returning="number_of_matches_in_period", @@ -295,13 +176,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC30_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC30_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC30, returning="number_of_matches_in_period", @@ -312,13 +186,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC31_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC31_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC31, returning="number_of_matches_in_period", @@ -329,13 +196,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC32_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HC32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC32_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HC32, returning="number_of_matches_in_period", @@ -346,13 +206,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD21_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD21_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD21, returning="number_of_matches_in_period", @@ -363,13 +216,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD23_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD23_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD23, returning="number_of_matches_in_period", @@ -380,13 +226,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD24_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD24_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD24, returning="number_of_matches_in_period", @@ -397,13 +236,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD25_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD25_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD25, returning="number_of_matches_in_period", @@ -414,13 +246,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD26_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD26_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD26, returning="number_of_matches_in_period", @@ -431,13 +256,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD39_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD39, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD39_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD39, returning="number_of_matches_in_period", @@ -448,13 +266,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HD40_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HD40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HD40_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HD40, returning="number_of_matches_in_period", @@ -465,13 +276,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE11_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE11_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE11, returning="number_of_matches_in_period", @@ -482,13 +286,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE12, returning="number_of_matches_in_period", @@ -499,13 +296,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE21_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE21_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE21, returning="number_of_matches_in_period", @@ -516,13 +306,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE22_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE22_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE22, returning="number_of_matches_in_period", @@ -533,13 +316,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE31_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE31_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE31, returning="number_of_matches_in_period", @@ -550,13 +326,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE32_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE32_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE32, returning="number_of_matches_in_period", @@ -567,13 +336,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE41_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE41_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE41, returning="number_of_matches_in_period", @@ -584,13 +346,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE42_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE42_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE42, returning="number_of_matches_in_period", @@ -601,13 +356,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE51_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE51_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE51, returning="number_of_matches_in_period", @@ -618,13 +366,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE52_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE52_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE52, returning="number_of_matches_in_period", @@ -635,13 +376,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE71_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE71_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE71, returning="number_of_matches_in_period", @@ -652,13 +386,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE72_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE72, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE72_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE72, returning="number_of_matches_in_period", @@ -669,13 +396,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE81_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE81, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE81_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE81, returning="number_of_matches_in_period", @@ -686,13 +406,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE82_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE82, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE82_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE82, returning="number_of_matches_in_period", @@ -703,13 +416,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HE83_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_HE83, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HE83_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_HE83, returning="number_of_matches_in_period", @@ -720,13 +426,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_JA12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_JA12, returning="number_of_matches_in_period", @@ -737,13 +436,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA13_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_JA13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA13_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_JA13, returning="number_of_matches_in_period", @@ -754,13 +446,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JB91_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_JB91, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JB91_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_JB91, returning="number_of_matches_in_period", @@ -771,13 +456,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JD07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_JD07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JD07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_JD07, returning="number_of_matches_in_period", @@ -788,13 +466,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KA05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KA05, returning="number_of_matches_in_period", @@ -805,13 +476,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KA06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KA06, returning="number_of_matches_in_period", @@ -822,13 +486,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KA07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KA07, returning="number_of_matches_in_period", @@ -839,13 +496,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KA08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KA08, returning="number_of_matches_in_period", @@ -856,13 +506,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KB02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KB02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KB02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KB02, returning="number_of_matches_in_period", @@ -873,13 +516,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KB03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KB03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KB03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KB03, returning="number_of_matches_in_period", @@ -890,13 +526,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KC04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KC04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KC04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KC04, returning="number_of_matches_in_period", @@ -907,13 +536,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KC05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_KC05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KC05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_KC05, returning="number_of_matches_in_period", @@ -924,13 +546,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LA04, returning="number_of_matches_in_period", @@ -941,13 +556,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LA07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LA07, returning="number_of_matches_in_period", @@ -958,13 +566,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LA08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LA08, returning="number_of_matches_in_period", @@ -975,13 +576,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LA09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LA09, returning="number_of_matches_in_period", @@ -992,13 +586,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB06, returning="number_of_matches_in_period", @@ -1009,13 +596,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB16_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB16_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB16, returning="number_of_matches_in_period", @@ -1026,13 +606,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB19_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB19_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB19, returning="number_of_matches_in_period", @@ -1043,13 +616,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB20_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB20_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB20, returning="number_of_matches_in_period", @@ -1060,13 +626,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB28_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB28_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB28, returning="number_of_matches_in_period", @@ -1077,13 +636,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB35_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB35_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB35, returning="number_of_matches_in_period", @@ -1094,13 +646,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB37_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB37, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB37_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB37, returning="number_of_matches_in_period", @@ -1111,13 +656,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB38_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB38_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB38, returning="number_of_matches_in_period", @@ -1128,13 +666,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB40_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB40_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB40, returning="number_of_matches_in_period", @@ -1145,13 +676,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB57_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB57_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB57, returning="number_of_matches_in_period", @@ -1162,13 +686,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB58_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_LB58, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB58_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_LB58, returning="number_of_matches_in_period", @@ -1179,13 +696,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY22, returning="number_of_matches_in_period", @@ -1196,13 +706,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY23, returning="number_of_matches_in_period", @@ -1213,13 +716,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY30, returning="number_of_matches_in_period", @@ -1230,13 +726,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY31, returning="number_of_matches_in_period", @@ -1247,13 +736,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY32, returning="number_of_matches_in_period", @@ -1264,13 +746,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY40, returning="number_of_matches_in_period", @@ -1281,13 +756,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY41, returning="number_of_matches_in_period", @@ -1298,13 +766,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY42, returning="number_of_matches_in_period", @@ -1315,13 +776,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY43, returning="number_of_matches_in_period", @@ -1332,13 +786,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY50, returning="number_of_matches_in_period", @@ -1349,13 +796,6 @@ def generate_variables_hrg2(index_date_variable): } ), - EY51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_EY51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - EY51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_EY51, returning="number_of_matches_in_period", @@ -1366,13 +806,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE01, returning="number_of_matches_in_period", @@ -1383,13 +816,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE02, returning="number_of_matches_in_period", @@ -1400,13 +826,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE03, returning="number_of_matches_in_period", @@ -1417,13 +836,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE10, returning="number_of_matches_in_period", @@ -1434,13 +846,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE11, returning="number_of_matches_in_period", @@ -1451,13 +856,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE12, returning="number_of_matches_in_period", @@ -1468,13 +866,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE13, returning="number_of_matches_in_period", @@ -1485,13 +876,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE20, returning="number_of_matches_in_period", @@ -1502,13 +886,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE21, returning="number_of_matches_in_period", @@ -1519,13 +896,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE22, returning="number_of_matches_in_period", @@ -1536,13 +906,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE30, returning="number_of_matches_in_period", @@ -1553,13 +916,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE31, returning="number_of_matches_in_period", @@ -1570,13 +926,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE32, returning="number_of_matches_in_period", @@ -1587,13 +936,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE33, returning="number_of_matches_in_period", @@ -1604,13 +946,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE34, returning="number_of_matches_in_period", @@ -1621,13 +956,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE35_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE35_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE35, returning="number_of_matches_in_period", @@ -1638,13 +966,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE36, returning="number_of_matches_in_period", @@ -1655,13 +976,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FE50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FE50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FE50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FE50, returning="number_of_matches_in_period", @@ -1672,13 +986,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF01, returning="number_of_matches_in_period", @@ -1689,13 +996,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF02, returning="number_of_matches_in_period", @@ -1706,13 +1006,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF04, returning="number_of_matches_in_period", @@ -1723,13 +1016,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF05, returning="number_of_matches_in_period", @@ -1740,13 +1026,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF12, returning="number_of_matches_in_period", @@ -1757,13 +1036,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF13, returning="number_of_matches_in_period", @@ -1774,13 +1046,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF14, returning="number_of_matches_in_period", @@ -1791,13 +1056,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF20, returning="number_of_matches_in_period", @@ -1808,13 +1066,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF21, returning="number_of_matches_in_period", @@ -1825,13 +1076,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF22, returning="number_of_matches_in_period", @@ -1842,13 +1086,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF30, returning="number_of_matches_in_period", @@ -1859,13 +1096,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF31, returning="number_of_matches_in_period", @@ -1876,13 +1106,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF32, returning="number_of_matches_in_period", @@ -1893,13 +1116,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF33, returning="number_of_matches_in_period", @@ -1910,13 +1126,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF34, returning="number_of_matches_in_period", @@ -1927,13 +1136,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF36, returning="number_of_matches_in_period", @@ -1944,13 +1146,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF37_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF37, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF37_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF37, returning="number_of_matches_in_period", @@ -1961,13 +1156,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF40, returning="number_of_matches_in_period", @@ -1978,13 +1166,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF41, returning="number_of_matches_in_period", @@ -1995,13 +1176,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF42, returning="number_of_matches_in_period", @@ -2012,13 +1186,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF43, returning="number_of_matches_in_period", @@ -2029,13 +1196,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF50, returning="number_of_matches_in_period", @@ -2046,13 +1206,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF51, returning="number_of_matches_in_period", @@ -2063,13 +1216,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF52, returning="number_of_matches_in_period", @@ -2080,13 +1226,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF53, returning="number_of_matches_in_period", @@ -2097,13 +1236,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF60, returning="number_of_matches_in_period", @@ -2114,13 +1246,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF61_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF61, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF61_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF61, returning="number_of_matches_in_period", @@ -2131,13 +1256,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF62_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF62, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF62_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF62, returning="number_of_matches_in_period", @@ -2148,13 +1266,6 @@ def generate_variables_hrg2(index_date_variable): } ), - FF63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_FF63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - FF63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_FF63, returning="number_of_matches_in_period", @@ -2165,13 +1276,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA03, returning="number_of_matches_in_period", @@ -2182,13 +1286,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA04, returning="number_of_matches_in_period", @@ -2199,13 +1296,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA05, returning="number_of_matches_in_period", @@ -2216,13 +1306,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA06, returning="number_of_matches_in_period", @@ -2233,13 +1316,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA07, returning="number_of_matches_in_period", @@ -2250,13 +1326,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA10, returning="number_of_matches_in_period", @@ -2267,13 +1336,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA11, returning="number_of_matches_in_period", @@ -2284,13 +1346,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA13, returning="number_of_matches_in_period", @@ -2301,13 +1356,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA15, returning="number_of_matches_in_period", @@ -2318,13 +1366,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GA16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GA16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GA16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GA16, returning="number_of_matches_in_period", @@ -2335,13 +1376,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB05, returning="number_of_matches_in_period", @@ -2352,13 +1386,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB06, returning="number_of_matches_in_period", @@ -2369,13 +1396,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB09, returning="number_of_matches_in_period", @@ -2386,13 +1406,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB10, returning="number_of_matches_in_period", @@ -2403,13 +1416,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB11, returning="number_of_matches_in_period", @@ -2420,13 +1426,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB12, returning="number_of_matches_in_period", @@ -2437,13 +1436,6 @@ def generate_variables_hrg2(index_date_variable): } ), - GB13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_GB13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - GB13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_GB13, returning="number_of_matches_in_period", @@ -2454,13 +1446,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC50, returning="number_of_matches_in_period", @@ -2471,13 +1456,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC53, returning="number_of_matches_in_period", @@ -2488,13 +1466,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC54, returning="number_of_matches_in_period", @@ -2505,13 +1476,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC60, returning="number_of_matches_in_period", @@ -2522,13 +1486,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC61_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC61, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC61_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC61, returning="number_of_matches_in_period", @@ -2539,13 +1496,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC62_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC62, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC62_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC62, returning="number_of_matches_in_period", @@ -2556,13 +1506,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC63, returning="number_of_matches_in_period", @@ -2573,13 +1516,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC64_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC64, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC64_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC64, returning="number_of_matches_in_period", @@ -2590,13 +1526,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC65_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC65_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC65, returning="number_of_matches_in_period", @@ -2607,13 +1536,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC70_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC70, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC70_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC70, returning="number_of_matches_in_period", @@ -2624,13 +1546,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC71, returning="number_of_matches_in_period", @@ -2641,13 +1556,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HC72_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HC72, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HC72_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HC72, returning="number_of_matches_in_period", @@ -2658,13 +1566,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN12, returning="number_of_matches_in_period", @@ -2675,13 +1576,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN13, returning="number_of_matches_in_period", @@ -2692,13 +1586,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN14, returning="number_of_matches_in_period", @@ -2709,13 +1596,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN15, returning="number_of_matches_in_period", @@ -2726,13 +1606,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN22, returning="number_of_matches_in_period", @@ -2743,13 +1616,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN23, returning="number_of_matches_in_period", @@ -2760,13 +1626,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN24, returning="number_of_matches_in_period", @@ -2777,13 +1636,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN25, returning="number_of_matches_in_period", @@ -2794,13 +1646,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN32, returning="number_of_matches_in_period", @@ -2811,13 +1656,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN33, returning="number_of_matches_in_period", @@ -2828,13 +1666,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN34, returning="number_of_matches_in_period", @@ -2845,13 +1676,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN35_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN35_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN35, returning="number_of_matches_in_period", @@ -2862,13 +1686,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN42, returning="number_of_matches_in_period", @@ -2879,13 +1696,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN43, returning="number_of_matches_in_period", @@ -2896,13 +1706,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN44, returning="number_of_matches_in_period", @@ -2913,13 +1716,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN45, returning="number_of_matches_in_period", @@ -2930,13 +1726,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN46_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN46, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN46_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN46, returning="number_of_matches_in_period", @@ -2947,13 +1736,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN52, returning="number_of_matches_in_period", @@ -2964,13 +1746,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN53, returning="number_of_matches_in_period", @@ -2981,13 +1756,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN54, returning="number_of_matches_in_period", @@ -2998,13 +1766,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN55, returning="number_of_matches_in_period", @@ -3015,13 +1776,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN62_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN62, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN62_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN62, returning="number_of_matches_in_period", @@ -3032,13 +1786,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN63, returning="number_of_matches_in_period", @@ -3049,13 +1796,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN64_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN64, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN64_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN64, returning="number_of_matches_in_period", @@ -3066,13 +1806,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN65_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN65_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN65, returning="number_of_matches_in_period", @@ -3083,13 +1816,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN81_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN81, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN81_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN81, returning="number_of_matches_in_period", @@ -3100,13 +1826,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN86_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN86, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN86_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN86, returning="number_of_matches_in_period", @@ -3117,13 +1836,6 @@ def generate_variables_hrg2(index_date_variable): } ), - HN93_count=patients.admitted_to_hospital( - with_these_procedures=hrg_HN93, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - HN93_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_HN93, returning="number_of_matches_in_period", @@ -3134,13 +1846,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JA20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JA20, returning="number_of_matches_in_period", @@ -3151,13 +1856,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JA30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JA30, returning="number_of_matches_in_period", @@ -3168,13 +1866,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JA34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JA34, returning="number_of_matches_in_period", @@ -3185,13 +1876,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA38_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JA38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA38_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JA38, returning="number_of_matches_in_period", @@ -3202,13 +1886,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JA43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JA43, returning="number_of_matches_in_period", @@ -3219,13 +1896,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JA45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JA45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JA45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JA45, returning="number_of_matches_in_period", @@ -3236,13 +1906,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JB70_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JB70, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JB70_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JB70, returning="number_of_matches_in_period", @@ -3253,13 +1916,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JB71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JB71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JB71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JB71, returning="number_of_matches_in_period", @@ -3270,13 +1926,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC40, returning="number_of_matches_in_period", @@ -3287,13 +1936,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC41, returning="number_of_matches_in_period", @@ -3304,13 +1946,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC42, returning="number_of_matches_in_period", @@ -3321,13 +1956,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC43, returning="number_of_matches_in_period", @@ -3338,13 +1966,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC44, returning="number_of_matches_in_period", @@ -3355,13 +1976,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC45, returning="number_of_matches_in_period", @@ -3372,13 +1986,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC46_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC46, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC46_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC46, returning="number_of_matches_in_period", @@ -3389,13 +1996,6 @@ def generate_variables_hrg2(index_date_variable): } ), - JC47_count=patients.admitted_to_hospital( - with_these_procedures=hrg_JC47, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - JC47_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_JC47, returning="number_of_matches_in_period", @@ -3406,13 +2006,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_KA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_KA03, returning="number_of_matches_in_period", @@ -3423,13 +2016,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_KA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_KA04, returning="number_of_matches_in_period", @@ -3440,13 +2026,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KA09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_KA09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KA09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_KA09, returning="number_of_matches_in_period", @@ -3457,13 +2036,6 @@ def generate_variables_hrg2(index_date_variable): } ), - KB04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_KB04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - KB04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_KB04, returning="number_of_matches_in_period", @@ -3474,13 +2046,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA01, returning="number_of_matches_in_period", @@ -3491,13 +2056,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA02, returning="number_of_matches_in_period", @@ -3508,13 +2066,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA03, returning="number_of_matches_in_period", @@ -3525,13 +2076,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA05, returning="number_of_matches_in_period", @@ -3542,13 +2086,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA10, returning="number_of_matches_in_period", @@ -3559,13 +2096,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA11, returning="number_of_matches_in_period", @@ -3576,13 +2106,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA12, returning="number_of_matches_in_period", @@ -3593,13 +2116,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA13, returning="number_of_matches_in_period", @@ -3610,13 +2126,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LA14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LA14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LA14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LA14, returning="number_of_matches_in_period", @@ -3627,13 +2136,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB09, returning="number_of_matches_in_period", @@ -3644,13 +2146,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB10, returning="number_of_matches_in_period", @@ -3661,13 +2156,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB12, returning="number_of_matches_in_period", @@ -3678,13 +2166,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB13, returning="number_of_matches_in_period", @@ -3695,13 +2176,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB14, returning="number_of_matches_in_period", @@ -3712,13 +2186,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB15, returning="number_of_matches_in_period", @@ -3729,13 +2196,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB17_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB17_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB17, returning="number_of_matches_in_period", @@ -3746,13 +2206,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB18, returning="number_of_matches_in_period", @@ -3763,13 +2216,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB21, returning="number_of_matches_in_period", @@ -3780,13 +2226,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB25, returning="number_of_matches_in_period", @@ -3797,13 +2236,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB26, returning="number_of_matches_in_period", @@ -3814,13 +2246,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB29_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB29_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB29, returning="number_of_matches_in_period", @@ -3831,13 +2256,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB33, returning="number_of_matches_in_period", @@ -3848,13 +2266,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB36, returning="number_of_matches_in_period", @@ -3865,13 +2276,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB39_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB39, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB39_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB39, returning="number_of_matches_in_period", @@ -3882,13 +2286,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB42, returning="number_of_matches_in_period", @@ -3899,13 +2296,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB43, returning="number_of_matches_in_period", @@ -3916,13 +2306,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB46_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB46, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB46_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB46, returning="number_of_matches_in_period", @@ -3933,13 +2316,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB47_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB47, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB47_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB47, returning="number_of_matches_in_period", @@ -3950,13 +2326,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB48_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB48, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB48_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB48, returning="number_of_matches_in_period", @@ -3967,13 +2336,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB50, returning="number_of_matches_in_period", @@ -3984,13 +2346,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB51, returning="number_of_matches_in_period", @@ -4001,13 +2356,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB52, returning="number_of_matches_in_period", @@ -4018,13 +2366,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB53, returning="number_of_matches_in_period", @@ -4035,13 +2376,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB54, returning="number_of_matches_in_period", @@ -4052,13 +2386,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB55, returning="number_of_matches_in_period", @@ -4069,13 +2396,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB56, returning="number_of_matches_in_period", @@ -4086,13 +2406,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB59_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB59, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB59_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB59, returning="number_of_matches_in_period", @@ -4103,13 +2416,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB60, returning="number_of_matches_in_period", @@ -4120,13 +2426,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB61_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB61, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB61_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB61, returning="number_of_matches_in_period", @@ -4137,13 +2436,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB64_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB64, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB64_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB64, returning="number_of_matches_in_period", @@ -4154,13 +2446,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB65_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB65_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB65, returning="number_of_matches_in_period", @@ -4171,13 +2456,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB67_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB67, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB67_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB67, returning="number_of_matches_in_period", @@ -4188,13 +2466,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB68_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB68, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB68_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB68, returning="number_of_matches_in_period", @@ -4205,13 +2476,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB70_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB70, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB70_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB70, returning="number_of_matches_in_period", @@ -4222,13 +2486,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB71, returning="number_of_matches_in_period", @@ -4239,13 +2496,6 @@ def generate_variables_hrg2(index_date_variable): } ), - LB72_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB72, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB72_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB72, returning="number_of_matches_in_period", diff --git a/analysis/variables_hrg3.py b/analysis/variables_hrg3.py index ac42ab0..bd9a1b7 100644 --- a/analysis/variables_hrg3.py +++ b/analysis/variables_hrg3.py @@ -6,13 +6,6 @@ def generate_variables_hrg3(index_date_variable): variables_hrg3 = dict( - MB05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_MB05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MB05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_MB05, returning="number_of_matches_in_period", @@ -23,13 +16,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MB08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_MB08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MB08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_MB08, returning="number_of_matches_in_period", @@ -40,13 +26,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MB09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_MB09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MB09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_MB09, returning="number_of_matches_in_period", @@ -57,13 +36,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ16_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ16_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ16, returning="number_of_matches_in_period", @@ -74,13 +46,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ17_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ17_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ17, returning="number_of_matches_in_period", @@ -91,13 +56,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ18_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ18_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ18, returning="number_of_matches_in_period", @@ -108,13 +66,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ19_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ19_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ19, returning="number_of_matches_in_period", @@ -125,13 +76,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ20_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ20_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ20, returning="number_of_matches_in_period", @@ -142,13 +86,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ25_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ25_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ25, returning="number_of_matches_in_period", @@ -159,13 +96,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ26_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_NZ26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ26_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_NZ26, returning="number_of_matches_in_period", @@ -176,13 +106,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA01, returning="number_of_matches_in_period", @@ -193,13 +116,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA02, returning="number_of_matches_in_period", @@ -210,13 +126,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA03, returning="number_of_matches_in_period", @@ -227,13 +136,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA04, returning="number_of_matches_in_period", @@ -244,13 +146,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA05, returning="number_of_matches_in_period", @@ -261,13 +156,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA06, returning="number_of_matches_in_period", @@ -278,13 +166,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA07, returning="number_of_matches_in_period", @@ -295,13 +176,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA08, returning="number_of_matches_in_period", @@ -312,13 +186,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA09, returning="number_of_matches_in_period", @@ -329,13 +196,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA11_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA11_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA11, returning="number_of_matches_in_period", @@ -346,13 +206,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA12, returning="number_of_matches_in_period", @@ -363,13 +216,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA17_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA17_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA17, returning="number_of_matches_in_period", @@ -380,13 +226,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA24_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA24_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA24, returning="number_of_matches_in_period", @@ -397,13 +236,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA25_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA25_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA25, returning="number_of_matches_in_period", @@ -414,13 +246,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA30_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA30_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA30, returning="number_of_matches_in_period", @@ -431,13 +256,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA31_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA31_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA31, returning="number_of_matches_in_period", @@ -448,13 +266,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA32_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA32_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA32, returning="number_of_matches_in_period", @@ -465,13 +276,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA35_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA35_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA35, returning="number_of_matches_in_period", @@ -482,13 +286,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA36_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA36_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA36, returning="number_of_matches_in_period", @@ -499,13 +296,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA37_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_SA37, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA37_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_SA37, returning="number_of_matches_in_period", @@ -516,13 +306,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_UZ01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_UZ01, returning="number_of_matches_in_period", @@ -533,13 +316,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_UZ02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_UZ02, returning="number_of_matches_in_period", @@ -550,13 +326,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_UZ03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_UZ03, returning="number_of_matches_in_period", @@ -567,13 +336,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_UZ04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_UZ04, returning="number_of_matches_in_period", @@ -584,13 +346,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ15_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_UZ15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ15_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_UZ15, returning="number_of_matches_in_period", @@ -601,13 +356,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VA10_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_VA10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VA10_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_VA10, returning="number_of_matches_in_period", @@ -618,13 +366,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD01, returning="number_of_matches_in_period", @@ -635,13 +376,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD02, returning="number_of_matches_in_period", @@ -652,13 +386,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD03, returning="number_of_matches_in_period", @@ -669,13 +396,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD04, returning="number_of_matches_in_period", @@ -686,13 +406,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD05, returning="number_of_matches_in_period", @@ -703,13 +416,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD06, returning="number_of_matches_in_period", @@ -720,13 +426,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD07, returning="number_of_matches_in_period", @@ -737,13 +436,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD08, returning="number_of_matches_in_period", @@ -754,13 +446,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WD09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WD09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WD09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WD09, returning="number_of_matches_in_period", @@ -771,13 +456,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH01, returning="number_of_matches_in_period", @@ -788,13 +466,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH02, returning="number_of_matches_in_period", @@ -805,13 +476,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH03, returning="number_of_matches_in_period", @@ -822,13 +486,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH04, returning="number_of_matches_in_period", @@ -839,13 +496,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH05_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH05_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH05, returning="number_of_matches_in_period", @@ -856,13 +506,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH06, returning="number_of_matches_in_period", @@ -873,13 +516,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH07, returning="number_of_matches_in_period", @@ -890,13 +526,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH08_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH08_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH08, returning="number_of_matches_in_period", @@ -907,13 +536,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH09_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH09_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH09, returning="number_of_matches_in_period", @@ -924,13 +546,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH10_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH10_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH10, returning="number_of_matches_in_period", @@ -941,13 +556,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH11_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH11_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH11, returning="number_of_matches_in_period", @@ -958,13 +566,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH12_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH12_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH12, returning="number_of_matches_in_period", @@ -975,13 +576,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH13_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH13_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH13, returning="number_of_matches_in_period", @@ -992,13 +586,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH14_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH14_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH14, returning="number_of_matches_in_period", @@ -1009,13 +596,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH15_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH15_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH15, returning="number_of_matches_in_period", @@ -1026,13 +606,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH16_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH16_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH16, returning="number_of_matches_in_period", @@ -1043,13 +616,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH17_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH17_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH17, returning="number_of_matches_in_period", @@ -1060,13 +626,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH18_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH18_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH18, returning="number_of_matches_in_period", @@ -1077,13 +636,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH19_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH19_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH19, returning="number_of_matches_in_period", @@ -1094,13 +646,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH20_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH20_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH20, returning="number_of_matches_in_period", @@ -1111,13 +656,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH21_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH21_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH21, returning="number_of_matches_in_period", @@ -1128,13 +666,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH22_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH22_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH22, returning="number_of_matches_in_period", @@ -1145,13 +676,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH23_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH23_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH23, returning="number_of_matches_in_period", @@ -1162,13 +686,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH50_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH50_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH50, returning="number_of_matches_in_period", @@ -1179,13 +696,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH51_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH51_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH51, returning="number_of_matches_in_period", @@ -1196,13 +706,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH52_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH52_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH52, returning="number_of_matches_in_period", @@ -1213,13 +716,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH53_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH53_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH53, returning="number_of_matches_in_period", @@ -1230,13 +726,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH99_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WH99, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH99_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WH99, returning="number_of_matches_in_period", @@ -1247,13 +736,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ01_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ01_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ01, returning="number_of_matches_in_period", @@ -1264,13 +746,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ02_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ02_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ02, returning="number_of_matches_in_period", @@ -1281,13 +756,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ03_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ03_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ03, returning="number_of_matches_in_period", @@ -1298,13 +766,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ04_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ04_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ04, returning="number_of_matches_in_period", @@ -1315,13 +776,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ06_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ06_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ06, returning="number_of_matches_in_period", @@ -1332,13 +786,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ07_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ07_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ07, returning="number_of_matches_in_period", @@ -1349,13 +796,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WJ10_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ10_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ10, returning="number_of_matches_in_period", @@ -1366,13 +806,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LB74_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB74, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB74_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB74, returning="number_of_matches_in_period", @@ -1383,13 +816,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LB75_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB75, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB75_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB75, returning="number_of_matches_in_period", @@ -1400,13 +826,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LB76_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB76, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB76_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB76, returning="number_of_matches_in_period", @@ -1417,13 +836,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LB77_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB77, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB77_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB77, returning="number_of_matches_in_period", @@ -1434,13 +846,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LB78_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LB78, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LB78_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LB78, returning="number_of_matches_in_period", @@ -1451,13 +856,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LE01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LE01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LE01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LE01, returning="number_of_matches_in_period", @@ -1468,13 +866,6 @@ def generate_variables_hrg3(index_date_variable): } ), - LE02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_LE02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - LE02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_LE02, returning="number_of_matches_in_period", @@ -1485,13 +876,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA01, returning="number_of_matches_in_period", @@ -1502,13 +886,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA02, returning="number_of_matches_in_period", @@ -1519,13 +896,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA03, returning="number_of_matches_in_period", @@ -1536,13 +906,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA04, returning="number_of_matches_in_period", @@ -1553,13 +916,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA07, returning="number_of_matches_in_period", @@ -1570,13 +926,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA09, returning="number_of_matches_in_period", @@ -1587,13 +936,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA10, returning="number_of_matches_in_period", @@ -1604,13 +946,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA11, returning="number_of_matches_in_period", @@ -1621,13 +956,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA12, returning="number_of_matches_in_period", @@ -1638,13 +966,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA22, returning="number_of_matches_in_period", @@ -1655,13 +976,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA23, returning="number_of_matches_in_period", @@ -1672,13 +986,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA24, returning="number_of_matches_in_period", @@ -1689,13 +996,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA25, returning="number_of_matches_in_period", @@ -1706,13 +1006,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA29_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA29_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA29, returning="number_of_matches_in_period", @@ -1723,13 +1016,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA30, returning="number_of_matches_in_period", @@ -1740,13 +1026,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA31, returning="number_of_matches_in_period", @@ -1757,13 +1036,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA32, returning="number_of_matches_in_period", @@ -1774,13 +1046,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA35_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA35, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA35_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA35, returning="number_of_matches_in_period", @@ -1791,13 +1056,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA36, returning="number_of_matches_in_period", @@ -1808,13 +1066,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA38_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA38_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA38, returning="number_of_matches_in_period", @@ -1825,13 +1076,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA44, returning="number_of_matches_in_period", @@ -1842,13 +1086,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA48_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA48, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA48_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA48, returning="number_of_matches_in_period", @@ -1859,13 +1096,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA52, returning="number_of_matches_in_period", @@ -1876,13 +1106,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA53, returning="number_of_matches_in_period", @@ -1893,13 +1116,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MA56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MA56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MA56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MA56, returning="number_of_matches_in_period", @@ -1910,13 +1126,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC07, returning="number_of_matches_in_period", @@ -1927,13 +1136,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC08, returning="number_of_matches_in_period", @@ -1944,13 +1146,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC09, returning="number_of_matches_in_period", @@ -1961,13 +1156,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC10, returning="number_of_matches_in_period", @@ -1978,13 +1166,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC11, returning="number_of_matches_in_period", @@ -1995,13 +1176,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC12, returning="number_of_matches_in_period", @@ -2012,13 +1186,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC20, returning="number_of_matches_in_period", @@ -2029,13 +1196,6 @@ def generate_variables_hrg3(index_date_variable): } ), - MC21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_MC21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - MC21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_MC21, returning="number_of_matches_in_period", @@ -2046,13 +1206,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ21, returning="number_of_matches_in_period", @@ -2063,13 +1216,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ22, returning="number_of_matches_in_period", @@ -2080,13 +1226,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ24, returning="number_of_matches_in_period", @@ -2097,13 +1236,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ27_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ27_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ27, returning="number_of_matches_in_period", @@ -2114,13 +1246,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ30, returning="number_of_matches_in_period", @@ -2131,13 +1256,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ40, returning="number_of_matches_in_period", @@ -2148,13 +1266,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ50, returning="number_of_matches_in_period", @@ -2165,13 +1276,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ51, returning="number_of_matches_in_period", @@ -2182,13 +1286,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ71_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ71, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ71_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ71, returning="number_of_matches_in_period", @@ -2199,13 +1296,6 @@ def generate_variables_hrg3(index_date_variable): } ), - NZ72_count=patients.admitted_to_hospital( - with_these_procedures=hrg_NZ72, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - NZ72_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_NZ72, returning="number_of_matches_in_period", @@ -2216,13 +1306,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD01, returning="number_of_matches_in_period", @@ -2233,13 +1316,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD08, returning="number_of_matches_in_period", @@ -2250,13 +1326,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD20, returning="number_of_matches_in_period", @@ -2267,13 +1336,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD30, returning="number_of_matches_in_period", @@ -2284,13 +1346,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD40, returning="number_of_matches_in_period", @@ -2301,13 +1356,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD47_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD47, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD47_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD47, returning="number_of_matches_in_period", @@ -2318,13 +1366,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD48_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD48, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD48_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD48, returning="number_of_matches_in_period", @@ -2335,13 +1376,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD50, returning="number_of_matches_in_period", @@ -2352,13 +1386,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD51, returning="number_of_matches_in_period", @@ -2369,13 +1396,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD60_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD60, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD60_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD60, returning="number_of_matches_in_period", @@ -2386,13 +1406,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RD61_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RD61, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RD61_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RD61, returning="number_of_matches_in_period", @@ -2403,13 +1416,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN01, returning="number_of_matches_in_period", @@ -2420,13 +1426,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN04, returning="number_of_matches_in_period", @@ -2437,13 +1436,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN07, returning="number_of_matches_in_period", @@ -2454,13 +1446,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN08, returning="number_of_matches_in_period", @@ -2471,13 +1456,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN09, returning="number_of_matches_in_period", @@ -2488,13 +1466,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN13, returning="number_of_matches_in_period", @@ -2505,13 +1476,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN14, returning="number_of_matches_in_period", @@ -2522,13 +1486,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN15, returning="number_of_matches_in_period", @@ -2539,13 +1496,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN16, returning="number_of_matches_in_period", @@ -2556,13 +1506,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN17_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN17_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN17, returning="number_of_matches_in_period", @@ -2573,13 +1516,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN18, returning="number_of_matches_in_period", @@ -2590,13 +1526,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN19_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN19_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN19, returning="number_of_matches_in_period", @@ -2607,13 +1536,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN20, returning="number_of_matches_in_period", @@ -2624,13 +1546,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN21, returning="number_of_matches_in_period", @@ -2641,13 +1556,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN22, returning="number_of_matches_in_period", @@ -2658,13 +1566,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN23, returning="number_of_matches_in_period", @@ -2675,13 +1576,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN24, returning="number_of_matches_in_period", @@ -2692,13 +1586,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN25, returning="number_of_matches_in_period", @@ -2709,13 +1596,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN26, returning="number_of_matches_in_period", @@ -2726,13 +1606,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN27_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN27_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN27, returning="number_of_matches_in_period", @@ -2743,13 +1616,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN28_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN28_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN28, returning="number_of_matches_in_period", @@ -2760,13 +1626,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN29_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN29_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN29, returning="number_of_matches_in_period", @@ -2777,13 +1636,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN30, returning="number_of_matches_in_period", @@ -2794,13 +1646,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN31, returning="number_of_matches_in_period", @@ -2811,13 +1656,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN32, returning="number_of_matches_in_period", @@ -2828,13 +1666,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN33, returning="number_of_matches_in_period", @@ -2845,13 +1676,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN34, returning="number_of_matches_in_period", @@ -2862,13 +1686,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN50, returning="number_of_matches_in_period", @@ -2879,13 +1696,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN51, returning="number_of_matches_in_period", @@ -2896,13 +1706,6 @@ def generate_variables_hrg3(index_date_variable): } ), - RN52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_RN52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - RN52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_RN52, returning="number_of_matches_in_period", @@ -2913,13 +1716,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA14, returning="number_of_matches_in_period", @@ -2930,13 +1726,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA15, returning="number_of_matches_in_period", @@ -2947,13 +1736,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA16, returning="number_of_matches_in_period", @@ -2964,13 +1746,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA18, returning="number_of_matches_in_period", @@ -2981,13 +1756,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA19_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA19_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA19, returning="number_of_matches_in_period", @@ -2998,13 +1766,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA20, returning="number_of_matches_in_period", @@ -3015,13 +1776,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA21, returning="number_of_matches_in_period", @@ -3032,13 +1786,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA22, returning="number_of_matches_in_period", @@ -3049,13 +1796,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA23, returning="number_of_matches_in_period", @@ -3066,13 +1806,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA26, returning="number_of_matches_in_period", @@ -3083,13 +1816,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA27_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA27_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA27, returning="number_of_matches_in_period", @@ -3100,13 +1826,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA33, returning="number_of_matches_in_period", @@ -3117,13 +1836,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA40, returning="number_of_matches_in_period", @@ -3134,13 +1846,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA42, returning="number_of_matches_in_period", @@ -3151,13 +1856,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA43, returning="number_of_matches_in_period", @@ -3168,13 +1866,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA44, returning="number_of_matches_in_period", @@ -3185,13 +1876,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SA45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SA45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SA45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SA45, returning="number_of_matches_in_period", @@ -3202,13 +1886,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB01, returning="number_of_matches_in_period", @@ -3219,13 +1896,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB02, returning="number_of_matches_in_period", @@ -3236,13 +1906,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB03, returning="number_of_matches_in_period", @@ -3253,13 +1916,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB04, returning="number_of_matches_in_period", @@ -3270,13 +1926,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB05, returning="number_of_matches_in_period", @@ -3287,13 +1936,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB06, returning="number_of_matches_in_period", @@ -3304,13 +1946,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB07, returning="number_of_matches_in_period", @@ -3321,13 +1956,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB08, returning="number_of_matches_in_period", @@ -3338,13 +1966,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB09, returning="number_of_matches_in_period", @@ -3355,13 +1976,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB10, returning="number_of_matches_in_period", @@ -3372,13 +1986,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB11, returning="number_of_matches_in_period", @@ -3389,13 +1996,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB12, returning="number_of_matches_in_period", @@ -3406,13 +2006,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB13, returning="number_of_matches_in_period", @@ -3423,13 +2016,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB14, returning="number_of_matches_in_period", @@ -3440,13 +2026,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB15, returning="number_of_matches_in_period", @@ -3457,13 +2036,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB16, returning="number_of_matches_in_period", @@ -3474,13 +2046,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SB17_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SB17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SB17_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SB17, returning="number_of_matches_in_period", @@ -3491,13 +2056,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC25, returning="number_of_matches_in_period", @@ -3508,13 +2066,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC26, returning="number_of_matches_in_period", @@ -3525,13 +2076,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC28_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC28_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC28, returning="number_of_matches_in_period", @@ -3542,13 +2086,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC29_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC29_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC29, returning="number_of_matches_in_period", @@ -3559,13 +2096,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC30, returning="number_of_matches_in_period", @@ -3576,13 +2106,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC40, returning="number_of_matches_in_period", @@ -3593,13 +2116,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC42, returning="number_of_matches_in_period", @@ -3610,13 +2126,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC44, returning="number_of_matches_in_period", @@ -3627,13 +2136,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC45, returning="number_of_matches_in_period", @@ -3644,13 +2146,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC47_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC47, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC47_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC47, returning="number_of_matches_in_period", @@ -3661,13 +2156,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC49_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC49, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC49_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC49, returning="number_of_matches_in_period", @@ -3678,13 +2166,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC51, returning="number_of_matches_in_period", @@ -3695,13 +2176,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC53, returning="number_of_matches_in_period", @@ -3712,13 +2186,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC54, returning="number_of_matches_in_period", @@ -3729,13 +2196,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC55, returning="number_of_matches_in_period", @@ -3746,13 +2206,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC56, returning="number_of_matches_in_period", @@ -3763,13 +2216,6 @@ def generate_variables_hrg3(index_date_variable): } ), - SC57_count=patients.admitted_to_hospital( - with_these_procedures=hrg_SC57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - SC57_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_SC57, returning="number_of_matches_in_period", @@ -3780,13 +2226,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_UZ05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_UZ05, returning="number_of_matches_in_period", @@ -3797,13 +2236,6 @@ def generate_variables_hrg3(index_date_variable): } ), - UZ06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_UZ06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - UZ06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_UZ06, returning="number_of_matches_in_period", @@ -3814,13 +2246,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC01, returning="number_of_matches_in_period", @@ -3831,13 +2256,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC02, returning="number_of_matches_in_period", @@ -3848,13 +2266,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC03, returning="number_of_matches_in_period", @@ -3865,13 +2276,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC04, returning="number_of_matches_in_period", @@ -3882,13 +2286,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC06, returning="number_of_matches_in_period", @@ -3899,13 +2296,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC08, returning="number_of_matches_in_period", @@ -3916,13 +2306,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC10, returning="number_of_matches_in_period", @@ -3933,13 +2316,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC12, returning="number_of_matches_in_period", @@ -3950,13 +2326,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC14, returning="number_of_matches_in_period", @@ -3967,13 +2336,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC16, returning="number_of_matches_in_period", @@ -3984,13 +2346,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC18, returning="number_of_matches_in_period", @@ -4001,13 +2356,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC20, returning="number_of_matches_in_period", @@ -4018,13 +2366,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC22, returning="number_of_matches_in_period", @@ -4035,13 +2376,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC24, returning="number_of_matches_in_period", @@ -4052,13 +2386,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC26, returning="number_of_matches_in_period", @@ -4069,13 +2396,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC28_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC28_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC28, returning="number_of_matches_in_period", @@ -4086,13 +2406,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC30, returning="number_of_matches_in_period", @@ -4103,13 +2416,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC32, returning="number_of_matches_in_period", @@ -4120,13 +2426,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC34, returning="number_of_matches_in_period", @@ -4137,13 +2436,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC36_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC36, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC36_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC36, returning="number_of_matches_in_period", @@ -4154,13 +2446,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC38_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC38_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC38, returning="number_of_matches_in_period", @@ -4171,13 +2456,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC40, returning="number_of_matches_in_period", @@ -4188,13 +2466,6 @@ def generate_variables_hrg3(index_date_variable): } ), - VC42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_VC42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - VC42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_VC42, returning="number_of_matches_in_period", @@ -4205,13 +2476,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WF01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_WF01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WF01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_WF01, returning="number_of_matches_in_period", @@ -4222,13 +2486,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WF02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_WF02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WF02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_WF02, returning="number_of_matches_in_period", @@ -4239,13 +2496,6 @@ def generate_variables_hrg3(index_date_variable): } ), - WH54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_WH54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WH54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_WH54, returning="number_of_matches_in_period", diff --git a/analysis/variables_hrg4.py b/analysis/variables_hrg4.py index 1bc04e7..ec349b7 100644 --- a/analysis/variables_hrg4.py +++ b/analysis/variables_hrg4.py @@ -6,13 +6,6 @@ def generate_variables_hrg4(index_date_variable): variables_hrg4 = dict( - WJ11_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_WJ11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - WJ11_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_WJ11, returning="number_of_matches_in_period", @@ -23,13 +16,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ50_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_YQ50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ50_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_YQ50, returning="number_of_matches_in_period", @@ -40,13 +26,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ51_count=patients.admitted_to_hospital( - with_these_primary_diagnoses=hrg_YQ51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ51_admissions=patients.admitted_to_hospital( with_these_primary_diagnoses=hrg_YQ51, returning="number_of_matches_in_period", @@ -57,13 +36,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD01, returning="number_of_matches_in_period", @@ -74,13 +46,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD02, returning="number_of_matches_in_period", @@ -91,13 +56,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD03, returning="number_of_matches_in_period", @@ -108,13 +66,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD04, returning="number_of_matches_in_period", @@ -125,13 +76,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD05, returning="number_of_matches_in_period", @@ -142,13 +86,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD06, returning="number_of_matches_in_period", @@ -159,13 +96,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD07, returning="number_of_matches_in_period", @@ -176,13 +106,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD08, returning="number_of_matches_in_period", @@ -193,13 +116,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD09, returning="number_of_matches_in_period", @@ -210,13 +126,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD10, returning="number_of_matches_in_period", @@ -227,13 +136,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD11, returning="number_of_matches_in_period", @@ -244,13 +146,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD12, returning="number_of_matches_in_period", @@ -261,13 +156,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD13, returning="number_of_matches_in_period", @@ -278,13 +166,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD14_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD14, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD14_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD14, returning="number_of_matches_in_period", @@ -295,13 +176,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD15, returning="number_of_matches_in_period", @@ -312,13 +186,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD16, returning="number_of_matches_in_period", @@ -329,13 +196,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD17_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD17, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD17_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD17, returning="number_of_matches_in_period", @@ -346,13 +206,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD18_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD18, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD18_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD18, returning="number_of_matches_in_period", @@ -363,13 +216,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD19_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD19, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD19_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD19, returning="number_of_matches_in_period", @@ -380,13 +226,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD20, returning="number_of_matches_in_period", @@ -397,13 +236,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD21, returning="number_of_matches_in_period", @@ -414,13 +246,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD22, returning="number_of_matches_in_period", @@ -431,13 +256,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD23, returning="number_of_matches_in_period", @@ -448,13 +266,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD24, returning="number_of_matches_in_period", @@ -465,13 +276,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD25, returning="number_of_matches_in_period", @@ -482,13 +286,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD26, returning="number_of_matches_in_period", @@ -499,13 +296,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD27_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD27, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD27_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD27, returning="number_of_matches_in_period", @@ -516,13 +306,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD28_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD28, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD28_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD28, returning="number_of_matches_in_period", @@ -533,13 +316,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD29_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD29, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD29_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD29, returning="number_of_matches_in_period", @@ -550,13 +326,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD30, returning="number_of_matches_in_period", @@ -567,13 +336,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD31, returning="number_of_matches_in_period", @@ -584,13 +346,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD32, returning="number_of_matches_in_period", @@ -601,13 +356,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD33, returning="number_of_matches_in_period", @@ -618,13 +366,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD34_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD34, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD34_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD34, returning="number_of_matches_in_period", @@ -635,13 +376,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD37_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD37, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD37_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD37, returning="number_of_matches_in_period", @@ -652,13 +386,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD38_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD38, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD38_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD38, returning="number_of_matches_in_period", @@ -669,13 +396,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD39_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD39, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD39_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD39, returning="number_of_matches_in_period", @@ -686,13 +406,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD40, returning="number_of_matches_in_period", @@ -703,13 +416,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD41, returning="number_of_matches_in_period", @@ -720,13 +426,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD42, returning="number_of_matches_in_period", @@ -737,13 +436,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD43, returning="number_of_matches_in_period", @@ -754,13 +446,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD44, returning="number_of_matches_in_period", @@ -771,13 +456,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD45, returning="number_of_matches_in_period", @@ -788,13 +466,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD46_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD46, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD46_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD46, returning="number_of_matches_in_period", @@ -805,13 +476,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD47_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD47, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD47_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD47, returning="number_of_matches_in_period", @@ -822,13 +486,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD48_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD48, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD48_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD48, returning="number_of_matches_in_period", @@ -839,13 +496,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD49_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD49, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD49_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD49, returning="number_of_matches_in_period", @@ -856,13 +506,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD50, returning="number_of_matches_in_period", @@ -873,13 +516,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD51, returning="number_of_matches_in_period", @@ -890,13 +526,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD52, returning="number_of_matches_in_period", @@ -907,13 +536,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD53, returning="number_of_matches_in_period", @@ -924,13 +546,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD54, returning="number_of_matches_in_period", @@ -941,13 +556,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD55_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD55, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD55_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD55, returning="number_of_matches_in_period", @@ -958,13 +566,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD56, returning="number_of_matches_in_period", @@ -975,13 +576,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD57_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD57_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD57, returning="number_of_matches_in_period", @@ -992,13 +586,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD58_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD58, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD58_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD58, returning="number_of_matches_in_period", @@ -1009,13 +596,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD90_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD90, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD90_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD90, returning="number_of_matches_in_period", @@ -1026,13 +606,6 @@ def generate_variables_hrg4(index_date_variable): } ), - XD91_count=patients.admitted_to_hospital( - with_these_procedures=hrg_XD91, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - XD91_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_XD91, returning="number_of_matches_in_period", @@ -1043,13 +616,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YA03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YA03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YA03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YA03, returning="number_of_matches_in_period", @@ -1060,13 +626,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YA04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YA04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YA04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YA04, returning="number_of_matches_in_period", @@ -1077,13 +636,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YA10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YA10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YA10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YA10, returning="number_of_matches_in_period", @@ -1094,13 +646,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YA11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YA11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YA11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YA11, returning="number_of_matches_in_period", @@ -1111,13 +656,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YA12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YA12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YA12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YA12, returning="number_of_matches_in_period", @@ -1128,13 +666,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YA13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YA13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YA13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YA13, returning="number_of_matches_in_period", @@ -1145,13 +676,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YC01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YC01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YC01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YC01, returning="number_of_matches_in_period", @@ -1162,13 +686,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YC10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YC10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YC10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YC10, returning="number_of_matches_in_period", @@ -1179,13 +696,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YD01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YD01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YD01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YD01, returning="number_of_matches_in_period", @@ -1196,13 +706,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YD02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YD02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YD02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YD02, returning="number_of_matches_in_period", @@ -1213,13 +716,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YD03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YD03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YD03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YD03, returning="number_of_matches_in_period", @@ -1230,13 +726,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YD04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YD04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YD04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YD04, returning="number_of_matches_in_period", @@ -1247,13 +736,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YD05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YD05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YD05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YD05, returning="number_of_matches_in_period", @@ -1264,13 +746,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YF01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YF01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YF01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YF01, returning="number_of_matches_in_period", @@ -1281,13 +756,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YF04_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YF04, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YF04_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YF04, returning="number_of_matches_in_period", @@ -1298,13 +766,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG01_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG01, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG01_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG01, returning="number_of_matches_in_period", @@ -1315,13 +776,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG02, returning="number_of_matches_in_period", @@ -1332,13 +786,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG05, returning="number_of_matches_in_period", @@ -1349,13 +796,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG06_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG06, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG06_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG06, returning="number_of_matches_in_period", @@ -1366,13 +806,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG07, returning="number_of_matches_in_period", @@ -1383,13 +816,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG10, returning="number_of_matches_in_period", @@ -1400,13 +826,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG11, returning="number_of_matches_in_period", @@ -1417,13 +836,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YG12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YG12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YG12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YG12, returning="number_of_matches_in_period", @@ -1434,13 +846,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH02, returning="number_of_matches_in_period", @@ -1451,13 +856,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH03_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH03, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH03_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH03, returning="number_of_matches_in_period", @@ -1468,13 +866,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH10_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH10, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH10_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH10, returning="number_of_matches_in_period", @@ -1485,13 +876,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH20, returning="number_of_matches_in_period", @@ -1502,13 +886,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH30, returning="number_of_matches_in_period", @@ -1519,13 +896,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH31, returning="number_of_matches_in_period", @@ -1536,13 +906,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YH32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YH32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YH32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YH32, returning="number_of_matches_in_period", @@ -1553,13 +916,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YJ09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YJ09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YJ09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YJ09, returning="number_of_matches_in_period", @@ -1570,13 +926,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YJ11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YJ11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YJ11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YJ11, returning="number_of_matches_in_period", @@ -1587,13 +936,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YJ13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YJ13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YJ13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YJ13, returning="number_of_matches_in_period", @@ -1604,13 +946,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YJ15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YJ15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YJ15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YJ15, returning="number_of_matches_in_period", @@ -1621,13 +956,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YL02_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YL02, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YL02_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YL02, returning="number_of_matches_in_period", @@ -1638,13 +966,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YL11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YL11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YL11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YL11, returning="number_of_matches_in_period", @@ -1655,13 +976,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YL12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YL12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YL12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YL12, returning="number_of_matches_in_period", @@ -1672,13 +986,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YL20_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YL20, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YL20_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YL20, returning="number_of_matches_in_period", @@ -1689,13 +996,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YL21_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YL21, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YL21_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YL21, returning="number_of_matches_in_period", @@ -1706,13 +1006,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YL30_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YL30, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YL30_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YL30, returning="number_of_matches_in_period", @@ -1723,13 +1016,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ05_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ05, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ05_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ05, returning="number_of_matches_in_period", @@ -1740,13 +1026,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ07_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ07, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ07_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ07, returning="number_of_matches_in_period", @@ -1757,13 +1036,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ08_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ08, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ08_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ08, returning="number_of_matches_in_period", @@ -1774,13 +1046,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ09_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ09, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ09_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ09, returning="number_of_matches_in_period", @@ -1791,13 +1056,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ12, returning="number_of_matches_in_period", @@ -1808,13 +1066,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ13_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ13, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ13_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ13, returning="number_of_matches_in_period", @@ -1825,13 +1076,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ15, returning="number_of_matches_in_period", @@ -1842,13 +1086,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ16, returning="number_of_matches_in_period", @@ -1859,13 +1096,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ22, returning="number_of_matches_in_period", @@ -1876,13 +1106,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ26, returning="number_of_matches_in_period", @@ -1893,13 +1116,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ31, returning="number_of_matches_in_period", @@ -1910,13 +1126,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ32_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ32, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ32_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ32, returning="number_of_matches_in_period", @@ -1927,13 +1136,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ40, returning="number_of_matches_in_period", @@ -1944,13 +1146,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ41, returning="number_of_matches_in_period", @@ -1961,13 +1156,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YQ42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YQ42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YQ42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YQ42, returning="number_of_matches_in_period", @@ -1978,13 +1166,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR11_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR11, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR11_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR11, returning="number_of_matches_in_period", @@ -1995,13 +1176,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR12_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR12, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR12_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR12, returning="number_of_matches_in_period", @@ -2012,13 +1186,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR15_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR15, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR15_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR15, returning="number_of_matches_in_period", @@ -2029,13 +1196,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR16_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR16, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR16_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR16, returning="number_of_matches_in_period", @@ -2046,13 +1206,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR22_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR22, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR22_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR22, returning="number_of_matches_in_period", @@ -2063,13 +1216,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR23_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR23, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR23_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR23, returning="number_of_matches_in_period", @@ -2080,13 +1226,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR24_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR24, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR24_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR24, returning="number_of_matches_in_period", @@ -2097,13 +1236,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR25_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR25, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR25_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR25, returning="number_of_matches_in_period", @@ -2114,13 +1246,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR26_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR26, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR26_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR26, returning="number_of_matches_in_period", @@ -2131,13 +1256,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR31_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR31, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR31_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR31, returning="number_of_matches_in_period", @@ -2148,13 +1266,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR33_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR33, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR33_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR33, returning="number_of_matches_in_period", @@ -2165,13 +1276,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR40_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR40, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR40_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR40, returning="number_of_matches_in_period", @@ -2182,13 +1286,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR41_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR41, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR41_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR41, returning="number_of_matches_in_period", @@ -2199,13 +1296,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR42_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR42, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR42_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR42, returning="number_of_matches_in_period", @@ -2216,13 +1306,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR43_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR43, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR43_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR43, returning="number_of_matches_in_period", @@ -2233,13 +1316,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR44_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR44, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR44_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR44, returning="number_of_matches_in_period", @@ -2250,13 +1326,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR45_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR45, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR45_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR45, returning="number_of_matches_in_period", @@ -2267,13 +1336,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR48_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR48, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR48_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR48, returning="number_of_matches_in_period", @@ -2284,13 +1346,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR50_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR50, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR50_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR50, returning="number_of_matches_in_period", @@ -2301,13 +1356,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR51_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR51, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR51_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR51, returning="number_of_matches_in_period", @@ -2318,13 +1366,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR52_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR52, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR52_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR52, returning="number_of_matches_in_period", @@ -2335,13 +1376,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR53_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR53, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR53_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR53, returning="number_of_matches_in_period", @@ -2352,13 +1386,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR54_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR54, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR54_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR54, returning="number_of_matches_in_period", @@ -2369,13 +1396,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR56_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR56, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR56_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR56, returning="number_of_matches_in_period", @@ -2386,13 +1406,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR57_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR57, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR57_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR57, returning="number_of_matches_in_period", @@ -2403,13 +1416,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR63_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR63, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR63_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR63, returning="number_of_matches_in_period", @@ -2420,13 +1426,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR65_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR65, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR65_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR65, returning="number_of_matches_in_period", @@ -2437,13 +1436,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR66_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR66, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR66_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR66, returning="number_of_matches_in_period", @@ -2454,13 +1446,6 @@ def generate_variables_hrg4(index_date_variable): } ), - YR67_count=patients.admitted_to_hospital( - with_these_procedures=hrg_YR67, - returning="binary_flag", - between = ["index_date", "index_date + 364 days"], - return_expectations={"incidence": 0.05}, - ), - YR67_admissions=patients.admitted_to_hospital( with_these_procedures=hrg_YR67, returning="number_of_matches_in_period",