Repositories list

• SumarizeFmriprep

  Public
  A script to generate a session summary from a fmriprep* (fmriprep-babies, nibabies, fmriprep, etc.) analysis

  Shell

  •

  MIT License

  •1•0•4•0•Updated May 16, 2025May 16, 2025

• stuff2NIDM

  Public
  Repo for the process of adding "stuff" (ie the results of fmriprep, etc. processing) to the NIDM graph.

  Python

  •

  MIT License

  •0•0•0•0•Updated May 16, 2025May 16, 2025

• reprostim

  Public
  Automated capture of audio-visual stimuli into BIDS datasets

  reproducible-researchpsychologyneuroimaging

  Python

  •4•5•44•1•Updated May 16, 2025May 16, 2025

• neurodocker

  Public
  Generate custom Docker and Singularity images, and minimize existing containers

  linuxsciencedockerfile+ 7reproducible-researchcontainersneurosciencesingularity-containernipypeapptainerdocker

  Python

  •

  Apache License 2.0

  •97•341•9•5•Updated May 15, 2025May 15, 2025

• repronim.org

  Public
  HTML

  •

  MIT License

  •5•0•30•3•Updated May 14, 2025May 14, 2025

• containers

  Public
  Containers "distribution" for reproducible neuroimaging

  Roff

  •

  Apache License 2.0

  •16•27•40•3•Updated May 14, 2025May 14, 2025

• reproin

  Public
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners

  Shell

  •

  MIT License

  •15•49•39•1•Updated May 12, 2025May 12, 2025

• module-intro

  Public
  Module i: An Introduction to Reproducible Neuroimaging training module

  JavaScript

  •

  Other

  •4•0•3•0•Updated May 9, 2025May 9, 2025

• reproflow-data-sync

  Public
  DataLad dataset with all samples of recorded "ReproEvents", "ReproStim", etc data for purpose of calibration and establishing processing

  Python

  •1•0•0•1•Updated May 7, 2025May 7, 2025

• OpenNeuroDerivatives-NIDM

  Public
  Dockerfile

  •0•1•5•0•Updated May 1, 2025May 1, 2025

• simple2_NIDM_examples

  Public
  ReproNim simple2 NIDM files for ABIDE/ADHD200 available from datalad

  Python

  •15•3•2•2•Updated Apr 18, 2025Apr 18, 2025

• repronim.github.io

  Public
  HTML

  •

  GNU General Public License v3.0

  •10•3•24•0•Updated Apr 8, 2025Apr 8, 2025

• reproschema-py

  Public
  Python

  •

  Apache License 2.0

  •9•2•15•4•Updated Mar 31, 2025Mar 31, 2025

• hbcd-redcap2rs

  Public
  Python

  •

  MIT License

  •1•0•0•0•Updated Mar 28, 2025Mar 28, 2025

• hbcd-redcap2rs_old

  Public archive
  this repo is archived, please go to https://github.com/ReproNim/hbcd-redcap2rs for the most updated information

  Python

  •1•0•1•1•Updated Mar 26, 2025Mar 26, 2025

• artwork

  Public
  Some artwork (logos etc)

  R

  •

  MIT License

  •2•0•2•0•Updated Mar 26, 2025Mar 26, 2025

• reproschema-library

  Public
  Python

  •

  Apache License 2.0

  •11•6•5•0•Updated Mar 12, 2025Mar 12, 2025

• reproschema-diff

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• demo-protocol

  Public
  an example protocol which serves as default protocol in schema-ui

  JavaScript

  •13•0•1•0•Updated Mar 3, 2025Mar 3, 2025

• reproschema-server

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Feb 26, 2025Feb 26, 2025

• reproschema2cde

  Public
  Python

  •

  MIT License

  •1•0•1•0•Updated Feb 25, 2025Feb 25, 2025

• SOBPHack-042025

  Public
  Website for SOBP BrainHack - 2025

  JavaScript

  •

  Other

  •5•0•3•0•Updated Feb 25, 2025Feb 25, 2025

• reproschema-ui

  Public
  UI to render ReproSchema based protocols and assessments.

  hacktoberfestjsonldform-ui

  Vue

  •

  Other

  •19•3•45•4•Updated Feb 22, 2025Feb 22, 2025

• segstats_jsonld

  Public
  Script to Export Freesurfer-based Parcellation/Segmentation Stats and Provenance as JSON-LD and NIDM

  brainweb

  Python

  •

  MIT License

  •7•1•9•3•Updated Feb 6, 2025Feb 6, 2025

• nimh-minimal

  Public
  Makefile

  •

  MIT License

  •4•1•2•0•Updated Jan 31, 2025Jan 31, 2025

• reproschema-backend

  Public
  Python

  •

  Apache License 2.0

  •4•0•5•1•Updated Nov 1, 2024Nov 1, 2024

• reproschema-agents

  Public
  multi-agent framework for reproschema

  MIT License

  •1•0•0•0•Updated Oct 9, 2024Oct 9, 2024

• reproschema

  Public
  A standardized form generation and data collection schema to harmonize results by design across projects.

  schemainteroperabilitystandardizing-assessments+ 1clinical-assessments

  Python

  •

  Other

  •22•16•13•3•Updated Oct 8, 2024Oct 8, 2024

• hbcd-loris2reproschema

  Public
  HBCD LORIS format to ReproSchema format

  1•0•0•0•Updated Sep 26, 2024Sep 26, 2024

• reproschema-protocol-cookiecutter

  Public
  A cookiecutter for reproschema protocols.

  Python

  •1•0•1•2•Updated Jul 1, 2024Jul 1, 2024