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lauraluebbert · web-flow · commit 0d28e77832ee · 2024-08-31T01:19:26.000+02:00
diff --git a/kb_python/main.py b/kb_python/main.py
@@ -1608,7 +1608,7 @@ def setup_extract_args(
         '-g',
         metavar='T2G',
         help=(
-            'Path to transcript-to-gene mapping file (required when target_type = gene or extract_all = True).'
+            'Path to transcript-to-gene mapping file (required when mm = False, target_type = "gene" (and extract_all_fast and extract_all_unmapped = False), OR extract_all = True).'
         ),
         type=str,
     )

Original file line number	Diff line number	Diff line change
`@@ -1608,7 +1608,7 @@ def setup_extract_args(`
`1608`	`1608`	`'-g',`
`1609`	`1609`	`metavar='T2G',`
`1610`	`1610`	`help=(`
`1611`		`- 'Path to transcript-to-gene mapping file (required when target_type = gene or extract_all = True).'`
	`1611`	`+ 'Path to transcript-to-gene mapping file (required when mm = False, target_type = "gene" (and extract_all_fast and extract_all_unmapped = False), OR extract_all = True).'`
`1612`	`1612`	`),`
`1613`	`1613`	`type=str,`
`1614`	`1614`	`)`