Update extract.py

lauraluebbert · web-flow · commit 395cec44d72b · 2024-08-14T15:21:33.000-07:00
diff --git a/kb_python/extract.py b/kb_python/extract.py
@@ -148,7 +148,7 @@ def get_mm_ecs(t2g_path, txnames, temp_dir):
             ecs_mm.append(row[0])
 
     logger.debug(
-        f"Found the following equivalence classes that map to multiple genes: {' ,'.join(ecs_mm)}"
+        f"Found the following equivalence classes that map to multiple genes: {' ,'.join(np.array(ecs_mm).astype(str))}"
     )
 
     return ecs_mm, ec_df

Original file line number	Diff line number	Diff line change
`@@ -148,7 +148,7 @@ def get_mm_ecs(t2g_path, txnames, temp_dir):`
`148`	`148`	`ecs_mm.append(row[0])`
`149`	`149`
`150`	`150`	`logger.debug(`
`151`		`- f"Found the following equivalence classes that map to multiple genes: {' ,'.join(ecs_mm)}"`
	`151`	`+ f"Found the following equivalence classes that map to multiple genes: {' ,'.join(np.array(ecs_mm).astype(str))}"`
`152`	`152`	`)`
`153`	`153`
`154`	`154`	`return ecs_mm, ec_df`