Dockerfile

FROM rocker/tidyverse:4.1.0

WORKDIR /home/rocker

RUN apt update -y && apt install -y libmariadb-dev libmariadbclient-dev

# install necessary libraries
RUN R -e "install.packages(c('sendmailR', 'dotenv', 'RCurl', 'checkmate', 'janitor', 'sqldf', 'DBI', 'RMariaDB', 'digest','rjson', 'dbx'))"
RUN R -e "install.packages(c('REDCapR', 'mRpostman', 'writexl'))"

# build and install this package
ADD . /home/rocker/redcapcustodian
RUN R CMD build redcapcustodian
RUN R CMD INSTALL redcapcustodian_*.tar.gz
RUN rm -rf redcapcustodian

# Add non-package things
ADD . /home/rocker
RUN rm -rf .Rbuildignore
RUN rm -rf NAMESPACE
RUN rm -rf R
RUN rm -rf .dockerignore
RUN rm -rf DESCRIPTION
RUN rm -rf hosts
RUN rm -rf host_template
RUN rm -rf make_host.sh
RUN rm -rf .Rhistory
RUN rm -rf Dockerfile

# Note where we are, what is there, and what's in the package dir
CMD pwd && ls -AlhF ./