diff --git a/.github/workflows/github-actions.yaml b/.github/workflows/github-actions.yaml index f824b40..41cadcc 100644 --- a/.github/workflows/github-actions.yaml +++ b/.github/workflows/github-actions.yaml @@ -27,9 +27,9 @@ jobs: run: | sudo apt-get update sudo apt-get install mash ncbi-blast+ libssl-dev libcurl4-openssl-dev mafft libssl-dev ca-certificates -y - sudo apt-get install python3-pip python3-dev python3-pandas python3-biopython -y + sudo apt-get install python3-pip python3-dev python3-biopython -y python3 -m pip install --upgrade pip setuptools - pip3 install pytest fastcluster openpyxl pycurl + pip3 install pytest fastcluster openpyxl pycurl pandas python3 -c "import pycurl" python setup.py install - name: Test with pytest