From e3cfe1617806e10b74a75ebd792170e86a5ad176 Mon Sep 17 00:00:00 2001
From: Jeffrey Hanson <jeffrey.hanson@uqconnect.edu.au>
Date: Sun, 26 May 2024 15:06:09 +1200
Subject: [PATCH] fix codecov

---
 .github/workflows/R-CMD-check-ubuntu.yaml | 17 ++++++++++++++++-
 1 file changed, 16 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/R-CMD-check-ubuntu.yaml b/.github/workflows/R-CMD-check-ubuntu.yaml
index 78ca66f..60f6bce 100644
--- a/.github/workflows/R-CMD-check-ubuntu.yaml
+++ b/.github/workflows/R-CMD-check-ubuntu.yaml
@@ -103,5 +103,20 @@ jobs:
 
       - name: Test coverage
         if: runner.os == 'Linux' && matrix.config.r == 'release'
-        run: covr::codecov()
+        run: |
+          cov <- covr::package_coverage(
+            quiet = FALSE,
+            clean = FALSE,
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
+          )
+          covr::to_cobertura(cov)
         shell: Rscript {0}
+
+      - uses: codecov/codecov-action@v4
+        if: runner.os == 'Linux' && matrix.config.r == 'release'
+        with:
+          fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }}
+          file: ./cobertura.xml
+          plugin: noop
+          disable_search: true
+          token: ${{ secrets.CODECOV_TOKEN }}