Skip to content

Merge branch 'main' into phili #968

Merge branch 'main' into phili

Merge branch 'main' into phili #968

Triggered via push December 4, 2024 13:57
Status Failure
Total duration 32m 43s
Artifacts 3

check-bioc.yml

on: push
Matrix: build-check
Fit to window
Zoom out
Zoom in

Annotations

6 errors and 26 warnings
macOS-latest (4.4)
R CMD check found WARNINGs
macOS-latest (4.4)
Process completed with exit code 1.
macOS-latest (4.4)
No such keg: /opt/homebrew/Cellar/pkg-config@0.29.2
windows-latest (4.4)
R CMD check found WARNINGs
windows-latest (4.4)
Process completed with exit code 1.
ubuntu-latest (devel)
Process completed with exit code 1.
ubuntu-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
macOS-latest (4.4)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
windows-latest (4.4)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
macOS-latest (4.4)
Found the following significant warnings:
macOS-latest (4.4)
prepare_Rd: Spectra.Rd: Only one \arguments section is allowed: the first will be used
macOS-latest (4.4)
Rd files with duplicated alias '[[,Spectra-method':
macOS-latest (4.4)
Undocumented arguments in Rd file 'Spectra.Rd'
macOS-latest (4.4)
See below...
macOS-latest (4.4)
prepare_Rd: Spectra.Rd: Only one \arguments section is allowed: the first will be used
macOS-latest (4.4)
Rd files with duplicated alias '[[,Spectra-method':
macOS-latest (4.4)
Undocumented arguments in Rd file 'Spectra.Rd'
macOS-latest (4.4)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (4.4)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (4.4)
Spectra.Rd: Only one \arguments section is allowed: the first will be used
windows-latest (4.4)
Spectra.Rd: Only one \arguments section is allowed: the first will be used
windows-latest (4.4)
file 'mzR/cleanup' did not have execute permissions: corrected
windows-latest (4.4)
file 'mzR/configure' did not have execute permissions: corrected
windows-latest (4.4)
Found the following significant warnings:
windows-latest (4.4)
prepare_Rd: Spectra.Rd: Only one \arguments section is allowed: the first will be used
windows-latest (4.4)
Rd files with duplicated alias '$,Spectra-method':
windows-latest (4.4)
Undocumented arguments in Rd file 'Spectra.Rd'
windows-latest (4.4)
See below...
windows-latest (4.4)
prepare_Rd: Spectra.Rd: Only one \arguments section is allowed: the first will be used
windows-latest (4.4)
Rd files with duplicated alias '$,Spectra-method':
windows-latest (4.4)
Undocumented arguments in Rd file 'Spectra.Rd'
ubuntu-latest (devel)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Artifacts

Produced during runtime
Name Size
Linux-biocversion-devel-r-devel-results
6.66 MB
Windows-biocversion-devel-r-devel-results
5.47 MB
macOS-biocversion-devel-r-devel-results
6.83 MB