miRNA_motifs

Description

Scripts and functions used to analyze overrepresented motifs in nematode upstream miRNA sequences

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
README.md		README.md
compute_K_sliding_window.py		compute_K_sliding_window.py
cummulative_distribution.py		cummulative_distribution.py
get_inter_mirna_seq.py		get_inter_mirna_seq.py
get_positions_from_mast.py		get_positions_from_mast.py
get_upstream_coding_genes.py		get_upstream_coding_genes.py
mirna_data_for_meme.py		mirna_data_for_meme.py
motif_TSS.py		motif_TSS.py
perMotfDiverg.py		perMotfDiverg.py
polymorphism.py		polymorphism.py
random_coding_gene_upstream_fetcher.py		random_coding_gene_upstream_fetcher.py
reverse_complement.py		reverse_complement.py
seqDiverg.py		seqDiverg.py
sort_mirna_with_motif.py		sort_mirna_with_motif.py
t_coffee_to_fasta.py		t_coffee_to_fasta.py