Update some GitHub Actions versions #281
Workflow file for this run
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Wheels | |
| on: | |
| pull_request: | |
| push: | |
| branches: | |
| - main | |
| - test | |
| tags: | |
| - '*' | |
| release: | |
| types: [published] | |
| jobs: | |
| build: | |
| # This workflow only runs on the origin org | |
| if: github.repository_owner == 'sgkit-dev' | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.10"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install setuptools twine wheel build | |
| - name: Build a source distribution and a wheel | |
| run: | | |
| python -m build --sdist --wheel | |
| python -m twine check --strict dist/* | |
| - name: Upload artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| path: dist | |
| unix-test: | |
| # This workflow only runs on the origin org | |
| if: github.repository_owner == 'sgkit-dev' | |
| needs: ['build'] | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.10", "3.11"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| # checkout repo to subdirectory to get access to scripts | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: sgkit-copy | |
| - name: Download artifacts | |
| uses: actions/download-artifact@v4.1.7 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install wheel and test | |
| run: | | |
| python -VV | |
| # Install the local wheel | |
| wheel=$(ls artifact/sgkit-*.whl) | |
| pip install ${wheel} ${wheel}[bgen] ${wheel}[plink] | |
| python sgkit-copy/.github/scripts/test_sgkit.py | |
| python sgkit-copy/.github/scripts/test_sgkit_bgen.py | |
| python sgkit-copy/.github/scripts/test_sgkit_plink.py | |
| windows-test: | |
| # This workflow only runs on the origin org | |
| if: github.repository_owner == 'sgkit-dev' | |
| runs-on: windows-latest | |
| needs: ['build'] | |
| strategy: | |
| matrix: | |
| python-version: ["3.10"] | |
| steps: | |
| # checkout repo to subdirectory to get access to scripts | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: sgkit-copy | |
| - name: Download artifacts | |
| uses: actions/download-artifact@v4.1.7 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install wheel and test | |
| run: | | |
| python -VV | |
| # Install the local wheel | |
| $env:wheel = $(ls artifact/sgkit-*.whl) | |
| pip install $env:wheel "$env:wheel[bgen]" "$env:wheel[plink]" | |
| python sgkit-copy/.github/scripts/test_sgkit.py | |
| python sgkit-copy/.github/scripts/test_sgkit_bgen.py | |
| python sgkit-copy/.github/scripts/test_sgkit_plink.py | |
| pypi-upload: | |
| if: github.repository_owner == 'sgkit-dev' | |
| runs-on: ubuntu-latest | |
| needs: ['unix-test', 'windows-test'] | |
| steps: | |
| - name: Download all | |
| uses: actions/download-artifact@v4.1.7 | |
| - name: Move to dist | |
| run: | | |
| mkdir dist | |
| cp */*.{whl,gz} dist/. | |
| - name: Publish package to TestPyPI | |
| if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags') | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.TEST_PYPI_API_TOKEN }} | |
| repository_url: https://test.pypi.org/legacy/ | |
| - name: Publish package to PyPI | |
| if: github.event_name == 'release' | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.PYPI_API_TOKEN }} |