Revert "Fix vcf2zarr tests (#1309)" #29
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| name: Build NumPy 1 | |
| on: | |
| push: | |
| pull_request: | |
| jobs: | |
| build: | |
| # Scheduled runs only on the origin org | |
| if: (github.event_name == 'schedule' && github.repository_owner == 'sgkit-dev') || (github.event_name != 'schedule') | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements-numpy1.txt -r requirements-numpy1-dev.txt | |
| # - name: Run pre-commit | |
| # uses: pre-commit/action@v3.0.1 | |
| - name: Test with pytest and coverage | |
| run: | | |
| pytest -v --cov=sgkit --cov-report=term-missing |