chore: test changes in testing framework in main branch of snakemake

[johanneskoester]

Summary by CodeRabbit

• New Features
  • Updated the dependency for the Snakemake package to pull the latest version directly from its GitHub repository, enabling access to the most recent features and fixes.

[coderabbitai]

Walkthrough

The change involves updating the dependency declaration for the snakemake package in the pyproject.toml file. The original version specified a version constraint, while the updated declaration now references the package directly from its GitHub repository. This modification shifts the source of the snakemake package from a version-based dependency to a direct link to the source code.

Changes

Files	Change Summary
pyproject.toml	Updated snakemake dependency from version ^8.20.0 to a Git repository reference (git="https://github.com/snakemake/snakemake").

Sequence Diagram(s)

sequenceDiagram
    participant User
    participant System
    participant GitHub

    User->>System: Request to install snakemake
    System->>GitHub: Fetch latest snakemake version
    GitHub-->>System: Provide latest snakemake code
    System-->>User: Install snakemake from GitHub

Loading

Poem

🐰 In the garden where I hop and play,
A change has come to brighten the day.
From versions old, we now take flight,
To GitHub's charm, oh what a sight!
With snakemake fresh, we’ll dance and twirl,
A joyful leap in our coding world! 🌼

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[coderabbitai]

Actionable comments posted: 0

Review details

Configuration used: .coderabbit.yaml
Review profile: CHILL

Commits

Files that changed from the base of the PR and between edadd3e and e5c2b4e.

Files selected for processing (1)

• pyproject.toml (1 hunks)

Additional comments not posted (1)

pyproject.toml (1)

28-28: Consider the implications of sourcing snakemake directly from its Git repository.

Switching the snakemake dependency from a version constraint to a direct Git repository link allows for the use of the latest commits, potentially accessing features or fixes not yet released. However, this change can introduce risks:

• Instability: The main branch may not always be stable, potentially introducing breaking changes or bugs.
• Reproducibility: Builds may vary over time without a locked version, making it harder to reproduce issues or ensure consistent behavior across environments.

Consider using a more stable branch or tagging a specific commit in the Git repository to mitigate these risks:

snakemake = { git="https://github.com/snakemake/snakemake", branch="stable" }

or

snakemake = { git="https://github.com/snakemake/snakemake", rev="a1b2c3d" }

[johanneskoester]

Ok, works again with the main branch. Fixes are now released in snakemake 8.20.1