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Once SLiM moves to the 'one ts per chromosome' model, we'll need some new tools. The main consideration here is that the nodes/indivs/pops tables need to agree between all the chromosomes' tree sequences.
For starting a SLiM simulation with msprime, I see two options:
simulate the whole genome in msprime then chop it up into a bunch of separate tree sequences
simulate each chromosome independently then union together the nodes tables, effectively saying that the sets of ancestors are disjoint between chromosomes
The text was updated successfully, but these errors were encountered:
Once SLiM moves to the 'one ts per chromosome' model, we'll need some new tools. The main consideration here is that the nodes/indivs/pops tables need to agree between all the chromosomes' tree sequences.
For starting a SLiM simulation with msprime, I see two options:
The text was updated successfully, but these errors were encountered: