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Hello!!! Thanks for the tool! I am trying to install it and it fails in the first step, make.... macbook pro 16gb ram, i7, macOS Mojave
Gaiella:AGAPE-master tmartinc$ cd src Gaiella:src tmartinc$ make ---clean--- cd lastz/src; make clean rm -f .o rm -f lastz rm -f lastz_D rm -f ../test_results/base_test.* rm -rf bin ---bindir--- mkdir -p bin ---build_lastz--- cd lastz/src; make lastz gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' lastz.c -o lastz.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' infer_scores.c -o infer_scores.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' seeds.c -o seeds.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' pos_table.c -o pos_table.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' quantum.c -o quantum.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' seed_search.c -o seed_search.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' diag_hash.c -o diag_hash.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' chain.c -o chain.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' gapped_extend.c -o gapped_extend.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' tweener.c -o tweener.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' masking.c -o masking.o gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' segment.c -o segment.o segment.c:1584:10: error: comparison of array 'st->seg' equal to a null pointer is always false [-Werror,-Wtautological-pointer-compare] if (st->seg == NULL) return; ~~~~^~~ ~~~~ 1 error generated. make[1]: *** [segment.o] Error 1 make: *** [build_lastz] Error 2
Thanks!!! Trini
The text was updated successfully, but these errors were encountered:
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Hello!!!
Thanks for the tool!
I am trying to install it and it fails in the first step, make....
macbook pro 16gb ram, i7, macOS Mojave
Gaiella:AGAPE-master tmartinc$ cd src
Gaiella:src tmartinc$ make
---clean---
cd lastz/src; make clean
rm -f .o
rm -f lastz
rm -f lastz_D
rm -f ../test_results/base_test.*
rm -rf bin
---bindir---
mkdir -p bin
---build_lastz---
cd lastz/src; make lastz
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' lastz.c -o lastz.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' infer_scores.c -o infer_scores.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' seeds.c -o seeds.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' pos_table.c -o pos_table.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' quantum.c -o quantum.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' seed_search.c -o seed_search.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' diag_hash.c -o diag_hash.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' chain.c -o chain.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' gapped_extend.c -o gapped_extend.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' tweener.c -o tweener.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' masking.c -o masking.o
gcc -c -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR=""1"" -DVERSION_MINOR=""03"" -DVERSION_SUBMINOR=""02"" -DREVISION_DATE=""20110719"" -DSUBVERSION_REV=""1567:1570"" -Dscore_type='I' segment.c -o segment.o
segment.c:1584:10: error: comparison of array 'st->seg' equal to a null pointer is always false [-Werror,-Wtautological-pointer-compare]
if (st->seg == NULL) return;
~~~~^~~ ~~~~
1 error generated.
make[1]: *** [segment.o] Error 1
make: *** [build_lastz] Error 2
Thanks!!!
Trini
The text was updated successfully, but these errors were encountered: